RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 NUDCD1Q96RS6 583 aa20.07■□□□□ 0.8
SFXN1-209ENST00000508290 MGME1Q9BQP7 344 aa20.07■□□□□ 0.8
SFXN1-209ENST00000508290 KLHL11Q9NVR0 708 aa20.07■□□□□ 0.8
SFXN1-209ENST00000508290 ADAMTS9Q9P2N4 1935 aa20.07■□□□□ 0.8
SFXN1-209ENST00000508290 IGLON5A6NGN9 336 aa20.06■□□□□ 0.8
SFXN1-209ENST00000508290 PIGNO95427 931 aa20.06■□□□□ 0.8
SFXN1-209ENST00000508290 ZFXP17010 805 aaPredicted RBP20.06■□□□□ 0.8
SFXN1-209ENST00000508290 CCNCP24863 283 aa20.06■□□□□ 0.8
SFXN1-209ENST00000508290 MMP13P45452 471 aa20.06■□□□□ 0.8
SFXN1-209ENST00000508290 SCNN1BP51168 640 aa20.06■□□□□ 0.8
SFXN1-209ENST00000508290 MMRN1Q13201 1228 aa20.06■□□□□ 0.8
SFXN1-209ENST00000508290 GCNT7Q6ZNI0 430 aa20.06■□□□□ 0.8
SFXN1-209ENST00000508290 SPATS2Q86XZ4 545 aaKnown RBP20.06■□□□□ 0.8
SFXN1-209ENST00000508290 SAP25Q8TEE9 199 aa20.06■□□□□ 0.8
SFXN1-209ENST00000508290 KLK6Q92876 244 aa20.06■□□□□ 0.8
SFXN1-209ENST00000508290 RNF157Q96PX1 679 aa20.06■□□□□ 0.8
SFXN1-209ENST00000508290 IMPACTQ9P2X3 320 aa20.06■□□□□ 0.8
SFXN1-209ENST00000508290 ATP8A1Q9Y2Q0 1164 aa20.06■□□□□ 0.8
SFXN1-209ENST00000508290 LRRD1A4D1F6 860 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 SPINT1O43278 529 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 MFSD11O43934 449 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 CR2P20023 1033 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 CDC25BP30305 580 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 RGRP47804 291 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 YPEL5P62699 121 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 AGERQ15109 404 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 ATP13A4Q4VNC1 1196 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 CAMK1DQ8IU85 385 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 TXLNBQ8N3L3 684 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 TEX26Q8N6G2 289 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.05■□□□□ 0.8
SFXN1-209ENST00000508290 KLF6Q99612 283 aaPredicted RBP20.05■□□□□ 0.8
SFXN1-209ENST00000508290 MAK16Q9BXY0 300 aaKnown RBP20.05■□□□□ 0.8
SFXN1-209ENST00000508290 SCUBE2Q9NQ36 999 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 GPR27Q9NS67 375 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 KCTD5Q9NXV2 234 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 ITM2BQ9Y287 266 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 PCDHA13Q9Y5I0 950 aa20.05■□□□□ 0.8
SFXN1-209ENST00000508290 SPTBN2O15020 2390 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 SPAARA0A1B0GVQ0 90 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 KCNK3O14649 394 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 RIOK3O14730 519 aaKnown RBP20.04■□□□□ 0.8
SFXN1-209ENST00000508290 MATN3O15232 486 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 TNFSF14O43557 240 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 PSTPIP1O43586 416 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 SPOPO43791 374 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 BUB1BO60566 1050 aaPredicted RBP20.04■□□□□ 0.8
SFXN1-209ENST00000508290 CDK4P11802 303 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 KRT10P13645 584 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 MMP12P39900 470 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 NOP2P46087 812 aaKnown RBP20.04■□□□□ 0.8
SFXN1-209ENST00000508290 FGL2Q14314 439 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 Q6ZSR6 202 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 PTAR1Q7Z6K3 402 aaPredicted RBP20.04■□□□□ 0.8
SFXN1-209ENST00000508290 TP53INP2Q8IXH6 220 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 NETO2Q8NC67 525 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 OR13H1Q8NG92 308 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 MAML1Q92585 1016 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 HDAC11Q96DB2 347 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 CAMK1GQ96NX5 476 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 POLR1EQ9GZS1 481 aaKnown RBP20.04■□□□□ 0.8
SFXN1-209ENST00000508290 FZD3Q9NPG1 666 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 PCDH12Q9NPG4 1184 aa20.04■□□□□ 0.8
SFXN1-209ENST00000508290 EPN1Q9Y6I3 576 aaPredicted RBP20.04■□□□□ 0.8
SFXN1-209ENST00000508290 GOLGA6L6A8MZA4 724 aa20.03■□□□□ 0.8
SFXN1-209ENST00000508290 TRAFD1O14545 582 aaPredicted RBP20.03■□□□□ 0.8
SFXN1-209ENST00000508290 MUSKO15146 869 aa20.03■□□□□ 0.8
SFXN1-209ENST00000508290 HTRA2O43464 458 aaPredicted RBP20.03■□□□□ 0.8
SFXN1-209ENST00000508290 NDUFA10O95299 355 aa20.03■□□□□ 0.8
SFXN1-209ENST00000508290 CA4P22748 312 aa20.03■□□□□ 0.8
SFXN1-209ENST00000508290 PTK2BQ14289 1009 aa20.03■□□□□ 0.8
SFXN1-209ENST00000508290 SHBQ15464 509 aa20.03■□□□□ 0.8
SFXN1-209ENST00000508290 C11orf63Q6NUN7 778 aa20.03■□□□□ 0.8
SFXN1-209ENST00000508290 BZW1Q7L1Q6 419 aaKnown RBP20.03■□□□□ 0.8
SFXN1-209ENST00000508290 GAS2L3Q86XJ1 694 aa20.03■□□□□ 0.8
SFXN1-209ENST00000508290 RAPGEF5Q92565 580 aa20.03■□□□□ 0.8
SFXN1-209ENST00000508290 CENPTQ96BT3 561 aa20.03■□□□□ 0.8
SFXN1-209ENST00000508290 BMFQ96LC9 184 aa20.03■□□□□ 0.8
SFXN1-209ENST00000508290 MYOCQ99972 504 aa20.03■□□□□ 0.8
SFXN1-209ENST00000508290 BRD8Q9H0E9 1235 aa20.03■□□□□ 0.8
SFXN1-209ENST00000508290 FTSJ1Q9UET6 329 aa20.03■□□□□ 0.8
SFXN1-209ENST00000508290 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.03■□□□□ 0.8
SFXN1-209ENST00000508290 SPTY2D1-AS1A0A0U1RR47 76 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 H3BM21 787 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 MMP20O60882 483 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 NEBLO76041 1014 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 KRT1P04264 644 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 FTH1P19P0C7X4 201 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 CLDN2P57739 230 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 PFN3P60673 137 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 HNRNPKP61978 463 aaKnown RBP eCLIP20.02■□□□□ 0.8
SFXN1-209ENST00000508290 HS1BP3Q53T59 392 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 SLC9A4Q6AI14 798 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 ALG1LQ6GMV1 187 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 PARGQ86W56 976 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 CPNE8Q86YQ8 564 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 NDUFAF2Q8N183 169 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 PQLC3Q8N755 202 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 ADAMTS14Q8WXS8 1223 aa20.02■□□□□ 0.8
SFXN1-209ENST00000508290 GGT7Q9UJ14 662 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms