RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 ATXN1LP0C7T5 689 aaKnown RBP9.47□□□□□ -0.89
DDX41-209ENST00000508279 IL4RP24394 825 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 EPHA8P29322 1005 aaPredicted RBP9.47□□□□□ -0.89
DDX41-209ENST00000508279 MAN1A1P33908 653 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 CYLC1P35663 651 aaPredicted RBP9.47□□□□□ -0.89
DDX41-209ENST00000508279 MMP13P45452 471 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 ARSEP51690 589 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 ELP6Q0PNE2 266 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 OVGP1Q12889 678 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 PDK2Q15119 407 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 LLGL1Q15334 1064 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 SHBQ15464 509 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 SPA17Q15506 151 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 UGP2Q16851 508 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 MARC1Q5VT66 337 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 DENND2CQ68D51 928 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 NCBP2-AS2Q69YL0 99 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 ERAP2Q6P179 960 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 IQCHQ86VS3 1027 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 ZSWIM9Q86XI8 627 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 PGBD5Q8N414 524 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 OXR1Q8N573 874 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 CCNYQ8ND76 341 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 PCDH19Q8TAB3 1148 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.47□□□□□ -0.89
DDX41-209ENST00000508279 VOPP1Q96AW1 172 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 RNF25Q96BH1 459 aaPredicted RBP9.47□□□□□ -0.89
DDX41-209ENST00000508279 BMFQ96LC9 184 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 ZNF641Q96N77 438 aaPredicted RBP9.47□□□□□ -0.89
DDX41-209ENST00000508279 TUBGCP5Q96RT8 1024 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 CDC6Q99741 560 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 ZNF670Q9BS34 389 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 SCNM1Q9BWG6 230 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 MAK16Q9BXY0 300 aaKnown RBP9.47□□□□□ -0.89
DDX41-209ENST00000508279 DNAJC28Q9NX36 388 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 RCOR3Q9P2K3 495 aaPredicted RBP9.47□□□□□ -0.89
DDX41-209ENST00000508279 DKK3Q9UBP4 350 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 APOBEC2Q9Y235 224 aaKnown RBP9.47□□□□□ -0.89
DDX41-209ENST00000508279 PCDHGC4Q9Y5F7 938 aa9.47□□□□□ -0.89
DDX41-209ENST00000508279 GOLGA4Q13439 2230 aaKnown RBP9.47□□□□□ -0.89
DDX41-209ENST00000508279 ARID1BQ8NFD5 2236 aaPredicted RBP9.46□□□□□ -0.89
DDX41-209ENST00000508279 SOWAHDA6NJG2 315 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 AREL1O15033 823 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 YKT6O15498 198 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 FFAR2O15552 330 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 CBFA2T3O75081 653 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 LDOC1O95751 146 aaPredicted RBP9.46□□□□□ -0.9
DDX41-209ENST00000508279 PCCBP05166 539 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 C6P13671 934 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 COMTP21964 271 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 KDELR1P24390 212 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 GARSP41250 739 aaKnown RBP9.46□□□□□ -0.9
DDX41-209ENST00000508279 ARHGAP25P42331 645 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 CSNK1DP48730 415 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 LIG3P49916 1009 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 THOP1P52888 689 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 NAP1L1P55209 391 aaKnown RBP9.46□□□□□ -0.9
DDX41-209ENST00000508279 DYNLT1P63172 113 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 GBE1Q04446 702 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 NSUN2Q08J23 767 aaKnown RBP eCLIP9.46□□□□□ -0.9
DDX41-209ENST00000508279 PDE1CQ14123 709 aaPredicted RBP9.46□□□□□ -0.9
DDX41-209ENST00000508279 HS1BP3Q53T59 392 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 FAM182AQ5T1J6 154 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 BRAT1Q6PJG6 821 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 SLCO6A1Q86UG4 719 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 RFX6Q8HWS3 928 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 SLC22A18ASQ8N1D0 253 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 SPC24Q8NBT2 197 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 SAP25Q8TEE9 199 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 MRFAP1L1Q96HT8 127 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 CNDP2Q96KP4 475 aaKnown RBP9.46□□□□□ -0.9
DDX41-209ENST00000508279 ZNF830Q96NB3 372 aaPredicted RBP9.46□□□□□ -0.9
DDX41-209ENST00000508279 ZNF599Q96NL3 588 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 PSKH2Q96QS6 385 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 C1QTNF7Q9BXJ2 289 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 C1QTNF2Q9BXJ5 285 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 GOLPH3Q9H4A6 298 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 ERVMER34-1Q9H9K5 563 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 NOD2Q9HC29 1040 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 INTUQ9ULD6 942 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 ATP8A1Q9Y2Q0 1164 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 PCDHA13Q9Y5I0 950 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 HEY1Q9Y5J3 304 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 HS3ST3A1Q9Y663 406 aa9.46□□□□□ -0.9
DDX41-209ENST00000508279 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.45□□□□□ -0.9
DDX41-209ENST00000508279 ENC1O14682 589 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 RIOK3O14730 519 aaKnown RBP9.45□□□□□ -0.9
DDX41-209ENST00000508279 APOL1O14791 398 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 TNFSF14O43557 240 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 IPO7O95373 1038 aaKnown RBP9.45□□□□□ -0.9
DDX41-209ENST00000508279 PEX11BO96011 259 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 CPP00450 1065 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 ELFN1P0C7U0 828 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 IGFALSP35858 605 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 HSPA9P38646 679 aaKnown RBP9.45□□□□□ -0.9
DDX41-209ENST00000508279 RABIFP47224 123 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 RXRGP48443 463 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 AP1S1P61966 158 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 POLR2LP62875 67 aaKnown RBP9.45□□□□□ -0.9
DDX41-209ENST00000508279 GALNT2Q10471 571 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms