RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 H7C0C1 242 aa15.13■□□□□ 0.01
RNF4-210ENST00000508235 TRAFD1O14545 582 aaPredicted RBP15.13■□□□□ 0.01
RNF4-210ENST00000508235 HTRA2O43464 458 aaPredicted RBP15.13■□□□□ 0.01
RNF4-210ENST00000508235 HLA-DQB2P05538 268 aa15.13■□□□□ 0.01
RNF4-210ENST00000508235 SYPP08247 313 aa15.13■□□□□ 0.01
RNF4-210ENST00000508235 TIMP2P16035 220 aa15.13■□□□□ 0.01
RNF4-210ENST00000508235 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
RNF4-210ENST00000508235 ATP5OP48047 213 aa15.13■□□□□ 0.01
RNF4-210ENST00000508235 AFF3P51826 1226 aaKnown RBP15.13■□□□□ 0.01
RNF4-210ENST00000508235 PPP2CBP62714 309 aa15.13■□□□□ 0.01
RNF4-210ENST00000508235 PPP2CAP67775 309 aa15.13■□□□□ 0.01
RNF4-210ENST00000508235 OTUD4Q01804 1114 aaKnown RBP15.13■□□□□ 0.01
RNF4-210ENST00000508235 TEX44Q53QW1 395 aa15.13■□□□□ 0.01
RNF4-210ENST00000508235 CDKL3Q8IVW4 592 aaPredicted RBP15.13■□□□□ 0.01
RNF4-210ENST00000508235 NDUFAF2Q8N183 169 aa15.13■□□□□ 0.01
RNF4-210ENST00000508235 ACTL9Q8TC94 416 aa15.13■□□□□ 0.01
RNF4-210ENST00000508235 LRRN4Q8WUT4 740 aa15.13■□□□□ 0.01
RNF4-210ENST00000508235 QKIQ96PU8 341 aaKnown RBP eCLIP15.13■□□□□ 0.011e-11■■■■■ 31.5
RNF4-210ENST00000508235 PARD6AQ9NPB6 346 aa15.13■□□□□ 0.01
RNF4-210ENST00000508235 SLC6A14Q9UN76 642 aa15.13■□□□□ 0.01
RNF4-210ENST00000508235 TRPM6Q9BX84 2022 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 PLXNA2O75051 1894 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 AREL1O15033 823 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 KIF5CO60282 957 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 GJB3O75712 270 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 STK10O94804 968 aaKnown RBP15.12■□□□□ 0.01
RNF4-210ENST00000508235 TGM1P22735 817 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 ABL2P42684 1182 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 EIF3EP60228 445 aaKnown RBP15.12■□□□□ 0.01
RNF4-210ENST00000508235 RACK1P63244 317 aaKnown RBP15.12■□□□□ 0.01
RNF4-210ENST00000508235 DSC2Q02487 901 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 ZBTB17Q13105 803 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 CCDC6Q16204 474 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 ARMC12Q5T9G4 340 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 AADACL2Q6P093 401 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 REXO1L1PQ8IX06 675 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 ZCCHC9Q8N567 271 aaKnown RBP15.12■□□□□ 0.01
RNF4-210ENST00000508235 CXorf40AQ8TE69 158 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 PDCD6IPQ8WUM4 868 aaKnown RBP15.12■□□□□ 0.01
RNF4-210ENST00000508235 HTR3CQ8WXA8 447 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 SERAC1Q96JX3 654 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 C1QTNF7Q9BXJ2 289 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 ZDHHC5Q9C0B5 715 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 JRKLQ9Y4A0 524 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 PCDHGC4Q9Y5F7 938 aa15.12■□□□□ 0.01
RNF4-210ENST00000508235 OTOGLQ3ZCN5 2332 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 TTC24A2A3L6 582 aaPredicted RBP15.11■□□□□ 0.01
RNF4-210ENST00000508235 PRAMEF26H0Y7S4 382 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 KCNK3O14649 394 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 RIOK3O14730 519 aaKnown RBP15.11■□□□□ 0.01
RNF4-210ENST00000508235 CPP00450 1065 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 RBP3P10745 1247 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 PTPN3P26045 913 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 MAT2AP31153 395 aaKnown RBP15.11■□□□□ 0.01
RNF4-210ENST00000508235 GRIA4P48058 902 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 ARHGAP8P85298 464 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 SGCGQ13326 291 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 KLF1Q13351 362 aaPredicted RBP15.11■□□□□ 0.01
RNF4-210ENST00000508235 SLC14A2Q15849 920 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 ZNF284Q2VY69 593 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 TMEM52BQ4KMG9 183 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 AASDHQ4L235 1098 aaPredicted RBP15.11■□□□□ 0.01
RNF4-210ENST00000508235 TMEM259Q4ZIN3 620 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 NAPEPLDQ6IQ20 393 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 ADAT2Q7Z6V5 191 aaKnown RBP15.11■□□□□ 0.01
RNF4-210ENST00000508235 KIAA2013Q8IYS2 634 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 CNTD1Q8N815 330 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 C1orf216Q8TAB5 229 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 ARRDC2Q8TBH0 407 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 FAM174AQ8TBP5 190 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 ASB12Q8WXK4 309 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 TEKT5Q96M29 485 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 AGAP3Q96P47 875 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 FRMD8P1Q9BZ68 369 aaPredicted RBP15.11■□□□□ 0.01
RNF4-210ENST00000508235 CAPN10Q9HC96 672 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 TM9SF3Q9HD45 589 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 PCDH12Q9NPG4 1184 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 AASDHPPTQ9NRN7 309 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 KLHL8Q9P2G9 620 aaPredicted RBP15.11■□□□□ 0.01
RNF4-210ENST00000508235 TRHDEQ9UKU6 1024 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 PHTF1Q9UMS5 762 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 PCDHB9Q9Y5E1 797 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 RAI2Q9Y5P3 530 aa15.11■□□□□ 0.01
RNF4-210ENST00000508235 CFAP69A5D8W1 941 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 PATE3B3GLJ2 98 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 MAGEC1O60732 1142 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 TM7SF2O76062 418 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 PGLSO95336 258 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 CYP2A6P11509 494 aaPredicted RBP15.1■□□□□ 0.01
RNF4-210ENST00000508235 HNRNPA2B1P22626 353 aaKnown RBP15.1■□□□□ 0.01
RNF4-210ENST00000508235 AKT2P31751 481 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 ATXN3P54252 364 aaPredicted RBP15.1■□□□□ 0.01
RNF4-210ENST00000508235 EPHB1P54762 984 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 RPL26P61254 145 aaKnown RBP15.1■□□□□ 0.01
RNF4-210ENST00000508235 FAM193AP78312 1265 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 IRX4P78413 519 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 TRAF2Q12933 501 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 STAT4Q14765 748 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 SF3A2Q15428 464 aaKnown RBP15.1■□□□□ 0.01
RNF4-210ENST00000508235 LRRC73Q5JTD7 316 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 323.9 ms