RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 SEC24AO95486 1093 aa9.51□□□□□ -0.89
NEK1-203ENST00000507142 NDST3O95803 873 aa9.51□□□□□ -0.89
NEK1-203ENST00000507142 GPC1P35052 558 aa9.51□□□□□ -0.89
NEK1-203ENST00000507142 KRT20P35900 424 aa9.51□□□□□ -0.89
NEK1-203ENST00000507142 ACTR1BP42025 376 aa9.51□□□□□ -0.89
NEK1-203ENST00000507142 ACTR1AP61163 376 aa9.51□□□□□ -0.89
NEK1-203ENST00000507142 TEX44Q53QW1 395 aa9.51□□□□□ -0.89
NEK1-203ENST00000507142 FAM47EQ6ZV65 393 aa9.51□□□□□ -0.89
NEK1-203ENST00000507142 CXorf38Q8TB03 319 aa9.51□□□□□ -0.89
NEK1-203ENST00000507142 ACTRT1Q8TDG2 376 aa9.51□□□□□ -0.89
NEK1-203ENST00000507142 FNIP1Q8TF40 1166 aa9.51□□□□□ -0.89
NEK1-203ENST00000507142 HDAC7Q8WUI4 952 aa9.51□□□□□ -0.89
NEK1-203ENST00000507142 CDH19Q9H159 772 aa9.51□□□□□ -0.89
NEK1-203ENST00000507142 DNMT3BQ9UBC3 853 aaKnown RBP9.51□□□□□ -0.89
NEK1-203ENST00000507142 A0A088AWK7 358 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 BTN3A1O00481 513 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 ZNF10P21506 573 aaPredicted RBP9.5□□□□□ -0.89
NEK1-203ENST00000507142 RASSF2P50749 326 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 CRADDP78560 199 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 HPCAP84074 193 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 CCINQ13939 588 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 PHF19Q5T6S3 580 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 BBS12Q6ZW61 710 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 PRPF18Q99633 342 aaKnown RBP9.5□□□□□ -0.89
NEK1-203ENST00000507142 OSBPL1AQ9BXW6 950 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 CAPS2Q9BXY5 557 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 KCNF1Q9H3M0 494 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 NMUR1Q9HB89 426 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 MED4Q9NPJ6 270 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 VPS45Q9NRW7 570 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 TMLHEQ9NVH6 421 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 GRID1Q9ULK0 1009 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 COLEC10Q9Y6Z7 277 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 SCN9AQ15858 1988 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 COL24A1Q17RW2 1714 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 C5orf58C9J3I9 102 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 AXIN1O15169 862 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 ADAM12O43184 909 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 ZNF217O75362 1048 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 SUN1O94901 812 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 ZSCAN5DPP0CG00 497 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 OXTRP30559 389 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 ELK3P41970 407 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 CCDC142Q17RM4 750 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.5□□□□□ -0.89
NEK1-203ENST00000507142 SH3PXD2AQ5TCZ1 1133 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 RASIP1Q5U651 963 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 LRRTM3Q86VH5 581 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 CACNA2D3Q8IZS8 1091 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 FAM46DQ8NEK8 389 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 OR2AP1Q8NGE2 309 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 LINC00597Q9H2U6 94 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 ELOVL6Q9H5J4 265 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 L3MBTL1Q9Y468 752 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 NCANO14594 1321 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 A0A1W2PP55 124 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 MATN3O15232 486 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 CXCL10P02778 98 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 ANXA5P08758 320 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 ETS1P14921 441 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 CDH3P22223 829 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 MAGOHP61326 146 aaKnown RBP9.5□□□□□ -0.89
NEK1-203ENST00000507142 GBE1Q04446 702 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 LRRC14Q15048 493 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 DBN1Q16643 649 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 PTPRNQ16849 979 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 B3GNT9Q6UX72 402 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 OR4K2Q8NGD2 314 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 FOXJ1Q92949 421 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 HAPLN2Q9GZV7 340 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 GNG14A0A1W2PPG7 69 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 OR2AG2A6NM03 316 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 PMM2O15305 246 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 MMP20O60882 483 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 BEST1O76090 585 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 PIGNO95427 931 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 HOXD8P13378 290 aaPredicted RBP9.5□□□□□ -0.89
NEK1-203ENST00000507142 ACTN3Q08043 901 aaPredicted RBP9.5□□□□□ -0.89
NEK1-203ENST00000507142 DUSP6Q16828 381 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 C22orf39Q6P5X5 142 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 CAMK1DQ8IU85 385 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 RBFAQ8N0V3 343 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 C3orf58Q8NDZ4 430 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 SDCCAG3Q96C92 435 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 TRIM55Q9BYV6 548 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 RIC8BQ9NVN3 520 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 TRIM33Q9UPN9 1127 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 NDUFB5O43674 189 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 RBP1P09455 135 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 ADRA1DP25100 572 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 HOXD13P35453 343 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 SOX9P48436 509 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 CCNHP51946 323 aaPredicted RBP9.5□□□□□ -0.89
NEK1-203ENST00000507142 CCNG1P51959 295 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 IL2P60568 153 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 MYLK3Q32MK0 819 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 HES6Q96HZ4 224 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 FAM126AQ9BYI3 521 aaPredicted RBP9.5□□□□□ -0.89
NEK1-203ENST00000507142 AHSPQ9NZD4 102 aa9.5□□□□□ -0.89
NEK1-203ENST00000507142 WHRNQ9P202 907 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms