RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 CLDN23Q96B33 292 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 EXOC2Q96KP1 924 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 ZNF641Q96N77 438 aaPredicted RBP7.27□□□□□ -1.25
NUP54-204ENST00000506098 ACOX2Q99424 681 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 TBL1YQ9BQ87 522 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 HINFPQ9BQA5 517 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 TACO1Q9BSH4 297 aaKnown RBP7.27□□□□□ -1.25
NUP54-204ENST00000506098 TDRD1Q9BXT4 1180 aaKnown RBP7.27□□□□□ -1.25
NUP54-204ENST00000506098 OSBPL1AQ9BXW6 950 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 NEUROG2Q9H2A3 272 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 SUV39H2Q9H5I1 410 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 ATP13A3Q9H7F0 1226 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 LTB4R2Q9NPC1 389 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 CASS4Q9NQ75 786 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 PRSS16Q9NQE7 514 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 UBP1Q9NZI7 540 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 DKK3Q9UBP4 350 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.27□□□□□ -1.25
NUP54-204ENST00000506098 IL36AQ9UHA7 158 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 RPL26L1Q9UNX3 145 aaKnown RBP7.27□□□□□ -1.25
NUP54-204ENST00000506098 TTLL3Q9Y4R7 772 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 V9GYY5 206 aaPredicted RBP7.27□□□□□ -1.25
NUP54-204ENST00000506098 ARHGEF17Q96PE2 2063 aaPredicted RBP7.26□□□□□ -1.25
NUP54-204ENST00000506098 TMEM131Q92545 1883 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 GON4LQ3T8J9 2241 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 ANKRD66B4E2M5 251 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 EIF3HO15372 352 aaKnown RBP eCLIP7.26□□□□□ -1.25
NUP54-204ENST00000506098 ADAM23O75077 832 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 RNF40O75150 1001 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 SIN3BO75182 1162 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 PMPCBO75439 489 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 PGLSO95336 258 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 NDST3O95803 873 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 AGTP01019 485 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 PRNPP04156 253 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 FGF1P05230 155 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 EPHX1P07099 455 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 CTSLP07711 333 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 PDHA1P08559 390 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 ATXN1LP0C7T5 689 aaKnown RBP7.26□□□□□ -1.25
NUP54-204ENST00000506098 MYBL2P10244 700 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 ALADP13716 330 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 HLA-EP13747 358 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 HLA-DPA1P20036 260 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 CD72P21854 359 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 TARSP26639 723 aaKnown RBP7.26□□□□□ -1.25
NUP54-204ENST00000506098 SERPINA4P29622 427 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 GRIA1P42261 906 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 RPS9P46781 194 aaKnown RBP7.26□□□□□ -1.25
NUP54-204ENST00000506098 NPY2RP49146 381 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 LMAN1P49257 510 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 SEC13P55735 322 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 CDH17Q12864 832 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 TRAF2Q12933 501 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 LRRC32Q14392 662 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 ELAVL3Q14576 367 aaKnown RBP7.26□□□□□ -1.25
NUP54-204ENST00000506098 ELF2Q15723 593 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 SLC1A5Q15758 541 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 C2orf27AQ580R0 203 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 EOGTQ5NDL2 527 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 SDE2Q6IQ49 451 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 GDPD4Q6W3E5 623 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 CEP128Q6ZU80 1094 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 RELL1Q8IUW5 271 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.26□□□□□ -1.25
NUP54-204ENST00000506098 CHPFQ8IZ52 775 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 STK40Q8N2I9 435 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 TAB3Q8N5C8 712 aaPredicted RBP7.26□□□□□ -1.25
NUP54-204ENST00000506098 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.26□□□□□ -1.25
NUP54-204ENST00000506098 ZNF366Q8N895 744 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 CHST14Q8NCH0 376 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 IPMKQ8NFU5 416 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 PIH1D2Q8WWB5 315 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 IFT81Q8WYA0 676 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 EDAQ92838 391 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 LRRC39Q96DD0 335 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 SIGLEC10Q96LC7 697 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 SERPINB12Q96P63 405 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 FSD1LQ9BXM9 530 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 RSPH9Q9H1X1 276 aaPredicted RBP7.26□□□□□ -1.25
NUP54-204ENST00000506098 MTG2Q9H4K7 406 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 XAB2Q9HCS7 855 aaKnown RBP7.26□□□□□ -1.25
NUP54-204ENST00000506098 CACNA2D2Q9NY47 1150 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 MTRF1LQ9UGC7 380 aaKnown RBP7.26□□□□□ -1.25
NUP54-204ENST00000506098 MUTYHQ9UIF7 546 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 FBXL21Q9UKT6 434 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 PPM1HQ9ULR3 514 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 MMP17Q9ULZ9 603 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 NFU1Q9UMS0 254 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 PHTF1Q9UMS5 762 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 NDRG2Q9UN36 371 aaKnown RBP7.26□□□□□ -1.25
NUP54-204ENST00000506098 PCDHGC4Q9Y5F7 938 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 RAI2Q9Y5P3 530 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 BDP1A6H8Y1 2624 aa7.26□□□□□ -1.25
NUP54-204ENST00000506098 BPTFQ12830 3046 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 A0A1W2PQF6 199 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 CCDC151A5D8V7 595 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 F5H423 210 aaPredicted RBP7.25□□□□□ -1.25
NUP54-204ENST00000506098 COQ9O75208 318 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 LEFTY1O75610 366 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms