RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 ROR2Q01974 943 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 ITGADQ13349 1161 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 DCTN2Q13561 401 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 RNPS1Q15287 305 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 HIST2H2ACQ16777 129 aaPredicted RBP4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 ESCO2Q56NI9 601 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 FAAH2Q6GMR7 532 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 TRILQ7L0X0 811 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 RSRC2Q7L4I2 434 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 SLC46A3Q7Z3Q1 461 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 PATL1Q86TB9 770 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 DIS3L2Q8IYB7 885 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 PRR26Q8N8Z3 221 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 CADM4Q8NFZ8 388 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 TDRD7Q8NHU6 1098 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 SNAPC3Q92966 411 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 C7orf26Q96N11 449 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 SIN3AQ96ST3 1273 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 MXRA8Q9BRK3 442 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 H2AFJQ9BTM1 129 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 AASSQ9UDR5 926 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 LSM4Q9Y4Z0 139 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 A3GALT2U3KPV4 340 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 CKAP5Q14008 2032 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 A0A0U1RQF3 1178 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 NPIPB15A6NHN6 443 aaPredicted RBP4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 VWA5AO00534 786 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 SEC14L5O43304 696 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 KLK8O60259 260 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 MT-CYBP00156 380 aaPredicted RBP4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 TFP02787 698 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 IRF1P10914 325 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 MYF6P23409 242 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 CDC25AP30304 524 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 HOXD3P31249 432 aaPredicted RBP4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 PGGT1BP53609 377 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 EIF3BP55884 814 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 ADORA2A-AS1P86434 159 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 CTTNQ14247 550 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 GSTA3Q16772 222 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 DCAF6Q58WW2 860 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 HAUS3Q68CZ6 603 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 FAM180BQ6P0A1 224 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 FBXO46Q6PJ61 603 aaPredicted RBP4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 CPLX4Q7Z7G2 160 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 ZCCHC9Q8N567 271 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 HDAC2Q92769 488 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 PABPC5Q96DU9 382 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 SF3B5Q9BWJ5 86 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 EBF3Q9H4W6 596 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 MRPL44Q9H9J2 332 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 CLK4Q9HAZ1 481 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 SMYD2Q9NRG4 433 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 CYSLTR2Q9NS75 346 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 OLA1Q9NTK5 396 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 TMEM51Q9NW97 253 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 HIF1ANQ9NWT6 349 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 IL36RNQ9UBH0 155 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 FZD10Q9ULW2 581 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 SCINQ9Y6U3 715 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 RUSC2Q8N2Y8 1516 aa4.19□□□□□ -1.74
TOPBP1-204ENST00000505804 FAM90A10PA6NDY2 464 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 LRRC53A6NM62 1247 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 J3KR12 359 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 BCAT2O15382 392 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 ASAP2O43150 1006 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 MTA2O94776 668 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 SOX30O94993 753 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 NTN1O95631 604 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 SPARCP09486 303 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 ETFAP13804 333 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 ITGAXP20702 1163 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 SHMT1P34896 483 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 PIGAP37287 484 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 ARL1P40616 181 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 POLGP54098 1239 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 KRT32Q14532 448 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 TBCEQ15813 527 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 SGO1Q5FBB7 561 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 CDC73Q6P1J9 531 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 Q8N9P0 234 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 NEXN-AS1Q8NBZ9 246 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 PPHLN1Q8NEY8 458 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 ARRDC2Q8TBH0 407 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 TRIB2Q92519 343 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 ERGIC1Q969X5 290 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 SKA1Q96BD8 255 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 PIP5K1AQ99755 562 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 DCLK3Q9C098 648 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 MAF1Q9H063 256 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 RANBP17Q9H2T7 1088 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 ZHX3Q9H4I2 956 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 PLEKHA4Q9H4M7 779 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 PRKRIP1Q9H875 184 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 BRF2Q9HAW0 419 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 MAGEE1Q9HCI5 957 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 PLK2Q9NYY3 685 aa4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 ORC3Q9UBD5 711 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 INTS6Q9UL03 887 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-204ENST00000505804 NFE2L3Q9Y4A8 694 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms