RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 FAM43BQ6ZT52 329 aaPredicted RBP17.1■□□□□ 0.33
LIN54-204ENST00000505397 DCUN1D1Q96GG9 259 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 ZNF419Q96HQ0 510 aaPredicted RBP17.1■□□□□ 0.33
LIN54-204ENST00000505397 PPP1R36Q96LQ0 422 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 HAPLN3Q96S86 360 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 TBL1YQ9BQ87 522 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.1■□□□□ 0.33
LIN54-204ENST00000505397 TTC3P53804 2025 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 MYO16Q9Y6X6 1858 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 SYN3O14994 580 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 NPHS1O60500 1241 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 OAZ2O95190 189 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 OR4Q2P0C623 313 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 AVPR1AP37288 418 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 TLR1Q15399 786 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 GRAMD1BQ3KR37 738 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 TMEM198Q66K66 360 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 SPATA22Q8NHS9 363 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 SCYL1Q96KG9 808 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 EPB41L1Q9H4G0 881 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 ABI2Q9NYB9 513 aaPredicted RBP17.09■□□□□ 0.33
LIN54-204ENST00000505397 DNAJA2O60884 412 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 SAT1P21673 171 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 ADRA1AP35348 466 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 MS4A2Q01362 244 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 ADGRE1Q14246 886 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 FLOT2Q14254 428 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 GPNMBQ14956 572 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 RBBP5Q15291 538 aaKnown RBP17.09■□□□□ 0.33
LIN54-204ENST00000505397 ARHGAP36Q6ZRI8 547 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 TAC4Q86UU9 113 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 DENND6AQ8IWF6 608 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 ARHGAP12Q8IWW6 846 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 SCML4Q8N228 414 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 NXNL1Q96CM4 212 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 CATSPER2Q96P56 530 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 IL12RB2Q99665 862 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 HIPK3Q9H422 1215 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 MRM3Q9HC36 420 aaKnown RBP17.09■□□□□ 0.33
LIN54-204ENST00000505397 BCAP29Q9UHQ4 241 aa17.09■□□□□ 0.33
LIN54-204ENST00000505397 TCAF2A6NFQ2 919 aa17.08■□□□□ 0.33
LIN54-204ENST00000505397 IGLV3-25P01717 112 aa17.08■□□□□ 0.33
LIN54-204ENST00000505397 SRGAP2BP0DMP2 458 aa17.08■□□□□ 0.33
LIN54-204ENST00000505397 HSPA1AP0DMV8 641 aaKnown RBP17.08■□□□□ 0.33
LIN54-204ENST00000505397 HSPA1BP0DMV9 641 aaKnown RBP17.08■□□□□ 0.33
LIN54-204ENST00000505397 MPP1Q00013 466 aa17.08■□□□□ 0.33
LIN54-204ENST00000505397 NFE2Q16621 373 aaPredicted RBP17.08■□□□□ 0.33
LIN54-204ENST00000505397 ARTNQ5T4W7 220 aa17.08■□□□□ 0.33
LIN54-204ENST00000505397 SCN4BQ8IWT1 228 aa17.08■□□□□ 0.33
LIN54-204ENST00000505397 PTCD2Q8WV60 388 aaKnown RBP17.08■□□□□ 0.33
LIN54-204ENST00000505397 SCLYQ96I15 445 aa17.08■□□□□ 0.33
LIN54-204ENST00000505397 GCNAQ96QF7 691 aa17.08■□□□□ 0.33
LIN54-204ENST00000505397 MRPL9Q9BYD2 267 aaKnown RBP17.08■□□□□ 0.33
LIN54-204ENST00000505397 ZCWPW1Q9H0M4 648 aa17.08■□□□□ 0.33
LIN54-204ENST00000505397 WDR41Q9HAD4 459 aa17.08■□□□□ 0.33
LIN54-204ENST00000505397 EFCAB1Q9HAE3 211 aa17.08■□□□□ 0.33
LIN54-204ENST00000505397 RAB26Q9ULW5 256 aa17.08■□□□□ 0.33
LIN54-204ENST00000505397 COPG1Q9Y678 874 aaKnown RBP17.08■□□□□ 0.33
LIN54-204ENST00000505397 VWA8A3KMH1 1905 aa17.08■□□□□ 0.33
LIN54-204ENST00000505397 FAM95CA0A1B0GW59 222 aa17.08■□□□□ 0.32
LIN54-204ENST00000505397 CCDC78A2IDD5 438 aa17.08■□□□□ 0.32
LIN54-204ENST00000505397 BCAS2O75934 225 aaPredicted RBP17.08■□□□□ 0.32
LIN54-204ENST00000505397 MT-CYBP00156 380 aaPredicted RBP17.08■□□□□ 0.32
LIN54-204ENST00000505397 SMIM18P0DKX4 95 aa17.08■□□□□ 0.32
LIN54-204ENST00000505397 CLCN2P51788 898 aa17.08■□□□□ 0.32
LIN54-204ENST00000505397 SLC5A3P53794 718 aa17.08■□□□□ 0.32
LIN54-204ENST00000505397 DNAJB13P59910 316 aa17.08■□□□□ 0.32
LIN54-204ENST00000505397 CTBP1Q13363 440 aa17.08■□□□□ 0.32
LIN54-204ENST00000505397 ZNF460Q14592 562 aa17.08■□□□□ 0.32
LIN54-204ENST00000505397 VARS2Q5ST30 1063 aaKnown RBP17.08■□□□□ 0.32
LIN54-204ENST00000505397 DLG3Q92796 817 aa17.08■□□□□ 0.32
LIN54-204ENST00000505397 CASD1Q96PB1 797 aa17.08■□□□□ 0.32
LIN54-204ENST00000505397 C15orf38-AP3S2A0A0A6YYH1 394 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 ACOT8O14734 319 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 VAPBO95292 243 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 ALDH2P05091 517 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 STMN1P16949 149 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 CYP2C18P33260 490 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 MRPS22P82650 360 aaKnown RBP17.07■□□□□ 0.32
LIN54-204ENST00000505397 FAM171A1Q5VUB5 890 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 ESRP1Q6NXG1 681 aaKnown RBP17.07■□□□□ 0.32
LIN54-204ENST00000505397 POTEHQ6S545 545 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 ARPINQ7Z6K5 226 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 NPAS4Q8IUM7 802 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 PELI3Q8N2H9 469 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 C2CD4AQ8NCU7 369 aaPredicted RBP17.07■□□□□ 0.32
LIN54-204ENST00000505397 ADCY4Q8NFM4 1077 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 SCAMP5Q8TAC9 235 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 USP33Q8TEY7 942 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 MRPL46Q9H2W6 279 aaKnown RBP17.07■□□□□ 0.32
LIN54-204ENST00000505397 GLOD4Q9HC38 313 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 TREX1Q9NSU2 369 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 ARHGEF38Q9NXL2 777 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 G3BP2Q9UN86 482 aaKnown RBP17.07■□□□□ 0.32
LIN54-204ENST00000505397 TCAF1Q9Y4C2 921 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 COMMD3-BMI1R4GMX3 469 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 PRSS51A0A1B0GVH4 220 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 SMIM31A0A1B0GVY4 71 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 ANXA9O76027 345 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 ME2P23368 584 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms