RNA–Protein interactions for RNA: ENST00000504872.5

APBB3-209, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-209	ENST00000504872	TTC31	Q49AM3	519 aa	Predicted RBP	10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	TIGD7	Q6NT04	549 aa	Predicted RBP	10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	NEK5	Q6P3R8	708 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	GDPD4	Q6W3E5	623 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	ERN2	Q76MJ5	926 aa	Known RBP	10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	LPCAT2	Q7L5N7	544 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	CCDC13	Q8IYE1	715 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	ATPAF2	Q8N5M1	289 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	LRRN4	Q8WUT4	740 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	P3H4	Q92791	437 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	SPACA7	Q96KW9	195 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	OMD	Q99983	421 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	GPR174	Q9BXC1	333 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	OSBPL1A	Q9BXW6	950 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	C6orf106	Q9H6K1	298 aa	Predicted RBP	10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	USP29	Q9HBJ7	922 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	TMEM74B	Q9NUR3	256 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	PILRB	Q9UKJ0	227 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	RAB23	Q9ULC3	237 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	PYCARD	Q9ULZ3	195 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	PCDHGA5	Q9Y5G8	931 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	NUMA1	Q14980	2115 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	TCRBV7S2A1N4T	A0A589	114 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	USP27X	A6NNY8	438 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	HACD1	B0YJ81	288 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	KPNA3	O00505	521 aa	Predicted RBP	10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	MAP3K13	O43283	966 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	ZSCAN12	O43309	604 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	FZD6	O60353	706 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	GJB3	O75712	270 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	RNASEH2A	O75792	299 aa	Known RBP	10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	SEMA4F	O95754	770 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	PRL	P01236	227 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	JCHAIN	P01591	159 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	MMP2	P08253	660 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	MMP13	P45452	471 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	SCNN1B	P51168	640 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	SUOX	P51687	545 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	ADPRH	P54922	357 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	AP1S1	P61966	158 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	RPL6	Q02878	288 aa	Known RBP	10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	NIPAL4	Q0D2K0	466 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	WASHC5	Q12768	1159 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	ZBTB17	Q13105	803 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	ZNF211	Q13398	564 aa	Predicted RBP	10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	RPS6KA1	Q15418	735 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	ELF2	Q15723	593 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	TEX44	Q53QW1	395 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	KAZN	Q674X7	775 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	FAM124A	Q86V42	546 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	ZSWIM9	Q86XI8	627 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	CAMK1D	Q8IU85	385 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	CCNY	Q8ND76	341 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	OR2T34	Q8NGX1	318 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	OR6K2	Q8NGY2	324 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	ACTL9	Q8TC94	416 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	FOXJ1	Q92949	421 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	RAB7B	Q96AH8	199 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	BIRC7	Q96CA5	298 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	TEKT5	Q96M29	485 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	KLHL32	Q96NJ5	620 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	CINP	Q9BW66	212 aa	Predicted RBP	10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	CARD9	Q9H257	536 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	ZDHHC6	Q9H6R6	413 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	NOD2	Q9HC29	1040 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	RBM22	Q9NW64	420 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	TPX2	Q9ULW0	747 aa	Known RBP	10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	FADS3	Q9Y5Q0	445 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	COL12A1	Q99715	3063 aa		10.82	□□□□□ -0.68
APBB3-209	ENST00000504872	ACACA	Q13085	2346 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	TTC24	A2A3L6	582 aa	Predicted RBP	10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	KCNK1	O00180	336 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	NDUFS2	O75306	463 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	TJP3	O95049	919 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	UGT2B4	P06133	528 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	PTMA	P06454	111 aa	Known RBP	10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	ZNF806	P0C7X5	589 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	ADRB3	P13945	408 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	CD68	P34810	354 aa	Predicted RBP	10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	HOXD12	P35452	270 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	CETN2	P41208	172 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	ABL2	P42684	1182 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	MAPK8	P45983	427 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	NEK3	P51956	506 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	DYNLT1	P63172	113 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	OTUD4	Q01804	1114 aa	Known RBP	10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	CCDC15	Q0P6D6	951 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	SIX1	Q15475	284 aa	Predicted RBP	10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	UGP2	Q16851	508 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	TMEM259	Q4ZIN3	620 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	ODF2	Q5BJF6	829 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	KIAA0895L	Q68EN5	471 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	PARS2	Q7L3T8	475 aa	Known RBP	10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	PRPF39	Q86UA1	669 aa	Known RBP	10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	TRIM69	Q86WT6	500 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	CACUL1	Q86Y37	369 aa		10.81	□□□□□ -0.68
APBB3-209	ENST00000504872	SYT12	Q8IV01	421 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms