RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 UTP20O75691 2785 aaKnown RBP13.31□□□□□ -0.28
DDX41-204ENST00000504807 CXorf51AA0A1B0GTR3 108 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 A6NNZ2 444 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 MUSKO15146 869 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 YKT6O15498 198 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 MMP20O60882 483 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 KRT38O76015 456 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 PRKCGP05129 697 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 TIMP2P16035 220 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 TNFAIP3P21580 790 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 IL1R2P27930 398 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 PBX1P40424 430 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 PRKCIP41743 596 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 PFN3P60673 137 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 RPS21P63220 83 aaKnown RBP13.3□□□□□ -0.28
DDX41-204ENST00000504807 INSM1Q01101 510 aaPredicted RBP13.3□□□□□ -0.28
DDX41-204ENST00000504807 UBAP2LQ14157 1087 aaKnown RBP13.3□□□□□ -0.28
DDX41-204ENST00000504807 NR1I3Q14994 352 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 ASIC2Q16515 512 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 AFMIDQ63HM1 303 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 HGSNATQ68CP4 663 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 TXNRD3NBQ6F5E7 133 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 KIAA1161Q6NSJ0 714 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 GDPD4Q6W3E5 623 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 ATG14Q6ZNE5 492 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 PTAR1Q7Z6K3 402 aaPredicted RBP13.3□□□□□ -0.28
DDX41-204ENST00000504807 CPNE8Q86YQ8 564 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 RBFAQ8N0V3 343 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 OXR1Q8N573 874 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 OR4C6Q8NH72 309 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 KCNE4Q8WWG9 221 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 CENPTQ96BT3 561 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 HIC2Q96JB3 615 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 AIPL1Q9NZN9 384 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 AP4E1Q9UPM8 1137 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 CLCA2Q9UQC9 943 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 COQ6Q9Y2Z9 468 aa13.3□□□□□ -0.28
DDX41-204ENST00000504807 USP9YO00507 2555 aaPredicted RBP13.3□□□□□ -0.28
DDX41-204ENST00000504807 DOPEY1Q5JWR5 2465 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 SPTY2D1-AS1A0A0U1RR47 76 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 TTC24A2A3L6 582 aaPredicted RBP13.29□□□□□ -0.28
DDX41-204ENST00000504807 GOLGA6L22H0YM25 854 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 LRCH4O75427 683 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 FTLP02792 175 aaPredicted RBP13.29□□□□□ -0.28
DDX41-204ENST00000504807 CELA2BP08218 269 aaPredicted RBP13.29□□□□□ -0.28
DDX41-204ENST00000504807 CKMT2P17540 419 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 ACP1P24666 158 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 PSMA2P25787 234 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 MIPP30301 263 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 ETFBP38117 255 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 ZNF165P49910 485 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 PAPOLAP51003 745 aaKnown RBP13.29□□□□□ -0.28
DDX41-204ENST00000504807 RHOAP61586 193 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 DCUN1D2Q6PH85 259 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 LUZP1Q86V48 1076 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 ZNF354CQ86Y25 554 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 TP53I13Q8NBR0 393 aaPredicted RBP13.29□□□□□ -0.28
DDX41-204ENST00000504807 ZNF578Q96N58 590 aaPredicted RBP13.29□□□□□ -0.28
DDX41-204ENST00000504807 LENG8Q96PV6 779 aaPredicted RBP13.29□□□□□ -0.28
DDX41-204ENST00000504807 WRAP53Q9BUR4 548 aaKnown RBP13.29□□□□□ -0.28
DDX41-204ENST00000504807 RETREG1Q9H6L5 497 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 CBX8Q9HC52 389 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 ETNK2Q9NVF9 386 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 DNAJC28Q9NX36 388 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 MYO6Q9UM54 1294 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 SRPK3Q9UPE1 567 aa13.29□□□□□ -0.28
DDX41-204ENST00000504807 A0A1W2PQC6 194 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 SYCE3A1L190 88 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 ENO4A6NNW6 628 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 PRAMEF11O60813 436 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 GCATO75600 419 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 POP4O95707 220 aaKnown RBP13.28□□□□□ -0.28
DDX41-204ENST00000504807 MPOP05164 745 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 ERCC2P18074 760 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 YBEYP58557 167 aaPredicted RBP13.28□□□□□ -0.28
DDX41-204ENST00000504807 TPI1P60174 286 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 SNRPD1P62314 119 aaKnown RBP13.28□□□□□ -0.28
DDX41-204ENST00000504807 ZNF211Q13398 564 aaPredicted RBP13.28□□□□□ -0.28
DDX41-204ENST00000504807 PDE1CQ14123 709 aaPredicted RBP13.28□□□□□ -0.28
DDX41-204ENST00000504807 VPS36Q86VN1 386 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 EXD3Q8N9H8 876 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 ZNF548Q8NEK5 533 aaPredicted RBP13.28□□□□□ -0.28
DDX41-204ENST00000504807 SNRNP27Q8WVK2 155 aaKnown RBP13.28□□□□□ -0.28
DDX41-204ENST00000504807 VCPIP1Q96JH7 1222 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 FEM1CQ96JP0 617 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 BTBD6Q96KE9 485 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 APOLD1Q96LR9 279 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 GDAP1L1Q96MZ0 367 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 EPAS1Q99814 870 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 DHX35Q9H5Z1 703 aaKnown RBP13.28□□□□□ -0.28
DDX41-204ENST00000504807 PARVAQ9NVD7 372 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 CNOT8Q9UFF9 292 aaKnown RBP13.28□□□□□ -0.28
DDX41-204ENST00000504807 HPCAL4Q9UM19 191 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 PCDHB1Q9Y5F3 818 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 HS3ST3A1Q9Y663 406 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 MYLKQ15746 1914 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 LRRK1Q38SD2 2015 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 TRPM6Q9BX84 2022 aa13.28□□□□□ -0.28
DDX41-204ENST00000504807 A0A1W2PNU3 283 aaPredicted RBP13.27□□□□□ -0.29
DDX41-204ENST00000504807 TSPAN11A1L157 253 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms