RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 LDOC1O95751 146 aaPredicted RBP14.38□□□□□ -0.11
HOXC9-202ENST00000504557 KRT7P08729 469 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 C1QTNF9P0C862 333 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 SHC2P98077 582 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 ITKQ08881 620 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 ELP6Q0PNE2 266 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 TBX2Q13207 712 aaPredicted RBP14.38□□□□□ -0.11
HOXC9-202ENST00000504557 PDE1CQ14123 709 aaPredicted RBP14.38□□□□□ -0.11
HOXC9-202ENST00000504557 GRM3Q14832 879 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 UGP2Q16851 508 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 ANKRD20A8PQ5CZ79 823 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 ERAP2Q6P179 960 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 SARM1Q6SZW1 724 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 MARCH9Q86YJ5 346 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 BAHD1Q8TBE0 780 aaPredicted RBP14.38□□□□□ -0.11
HOXC9-202ENST00000504557 TSC1Q92574 1164 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 TUBGCP5Q96RT8 1024 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 ERVMER34-1Q9H9K5 563 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 SCUBE2Q9NQ36 999 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 UCKL1Q9NWZ5 548 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 DKK3Q9UBP4 350 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 TFR2Q9UP52 801 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 COL5A1P20908 1838 aaPredicted RBP14.37□□□□□ -0.11
HOXC9-202ENST00000504557 ENC1O14682 589 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 LZTS3O60299 673 aaPredicted RBP14.37□□□□□ -0.11
HOXC9-202ENST00000504557 MAFKO60675 156 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 NEBLO76041 1014 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 TRIM16O95361 564 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 IL4RP24394 825 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 IGFALSP35858 605 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 MMP13P45452 471 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 NOP2P46087 812 aaKnown RBP14.37□□□□□ -0.11
HOXC9-202ENST00000504557 RENBPP51606 427 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 THOP1P52888 689 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 RFTN1Q14699 578 aaPredicted RBP14.37□□□□□ -0.11
HOXC9-202ENST00000504557 TCEA2Q15560 299 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 ODF2Q5BJF6 829 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 TPRG1LQ5T0D9 272 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 DENND2CQ68D51 928 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 NCBP2-AS2Q69YL0 99 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 KYAT3Q6YP21 454 aaKnown RBP14.37□□□□□ -0.11
HOXC9-202ENST00000504557 ABI3BPQ7Z7G0 1075 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 MAP7D3Q8IWC1 876 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 BBS5Q8N3I7 341 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 PGBD5Q8N414 524 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 TC2NQ8N9U0 490 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 PCDH19Q8TAB3 1148 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 ZNF641Q96N77 438 aaPredicted RBP14.37□□□□□ -0.11
HOXC9-202ENST00000504557 KLF6Q99612 283 aaPredicted RBP14.37□□□□□ -0.11
HOXC9-202ENST00000504557 NT5MQ9NPB1 228 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 MBNL1Q9NR56 388 aaKnown RBP14.37□□□□□ -0.11
HOXC9-202ENST00000504557 WASF3Q9UPY6 502 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 ATP8A1Q9Y2Q0 1164 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 PCDHGC4Q9Y5F7 938 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 HS3ST3A1Q9Y663 406 aa14.37□□□□□ -0.11
HOXC9-202ENST00000504557 KRT1P04264 644 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 PCCBP05166 539 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 C6P13671 934 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 RABIFP47224 123 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 RXRGP48443 463 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 LIG3P49916 1009 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 ARSEP51690 589 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 ZNF75DP51815 510 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 CLDN6P56747 220 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 AP1S1P61966 158 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 PDK2Q15119 407 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 IRF4Q15306 451 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 ST3GAL2Q16842 350 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 HS1BP3Q53T59 392 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 FAM182AQ5T1J6 154 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 MARC1Q5VT66 337 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 BRAT1Q6PJG6 821 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 DHRS13Q6UX07 377 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 UNQ6494/PRO21346Q6UXR6 183 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 RAB44Q7Z6P3 723 aaPredicted RBP14.36□□□□□ -0.11
HOXC9-202ENST00000504557 GLRX5Q86SX6 157 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 RHOT2Q8IXI1 618 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 RFFLQ8WZ73 363 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 RAPGEF5Q92565 580 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 NSMCE3Q96MG7 304 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 ZNF599Q96NL3 588 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 PSKH2Q96QS6 385 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 C1QTNF7Q9BXJ2 289 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 TOR4AQ9NXH8 423 aa14.36□□□□□ -0.11
HOXC9-202ENST00000504557 RCOR3Q9P2K3 495 aaPredicted RBP14.36□□□□□ -0.11
HOXC9-202ENST00000504557 LRP4O75096 1905 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 SPEGQ15772 3267 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 TSPAN11A1L157 253 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 FAM149AA5PLN7 773 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 RIOK3O14730 519 aaKnown RBP14.35□□□□□ -0.11
HOXC9-202ENST00000504557 SCAMP1O15126 338 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 SPOPO43791 374 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 PEX11BO96011 259 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 MYF5P13349 255 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 DGKAP23743 735 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 KDELR1P24390 212 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 MMP12P39900 470 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 GARSP41250 739 aaKnown RBP14.35□□□□□ -0.11
HOXC9-202ENST00000504557 MAGEA1P43355 309 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 CSNK1DP48730 415 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms