RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 TMEM5Q9Y2B1 443 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 COL1A1P02452 1464 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 GRID2IPA4D2P6 1211 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 DDTLA6NHG4 134 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 STX16-NPEPL1H3BU86 382 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PSMD11O00231 422 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SYN3O14994 580 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 VEGFDO43915 354 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TOMM70O94826 608 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 IL33O95760 270 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ECDO95905 644 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 CALCAP01258 141 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 IL1R1P14778 569 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 MUC1P15941 1255 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ITGA2P17301 1181 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TAC1P20366 129 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SERPINB5P36952 375 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TOB1P50616 345 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 CASP9P55211 416 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 HUNKP57058 714 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SSTP61278 116 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ERVK-21P61565 698 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 HERVK_113P62684 666 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 CAP1Q01518 475 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 DHX34Q14147 1143 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PPA1Q15181 289 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PCBP1Q15365 356 aaKnown RBP eCLIP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SMAD2Q15796 467 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 AMHR2Q16671 573 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PRPF38BQ5VTL8 546 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 FRA10AC1Q70Z53 315 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TAS2R42Q7RTR8 314 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF786Q8N393 782 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 EFCAB3Q8N7B9 438 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 DAGLBQ8NCG7 672 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF461Q8TAF7 563 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC5A5Q92911 643 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 RMDN1Q96DB5 314 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF560Q96MR9 790 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 CDRT15Q96T59 188 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 BCL7BQ9BQE9 202 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TSEN34Q9BSV6 310 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 GPR62Q9BZJ7 368 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 POLR3FQ9H1D9 316 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PABPC3Q9H361 631 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 RNPEPQ9H4A4 650 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TRPV4Q9HBA0 871 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 CYP4F12Q9HCS2 524 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ACP6Q9NPH0 428 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 RNF146Q9NTX7 359 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 FBXO28Q9NVF7 368 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 GPATCH2LQ9NWQ4 482 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 APEX2Q9UBZ4 518 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PHTF1Q9UMS5 762 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PLAGL2Q9UPG8 496 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 INVSQ9Y283 1065 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SPEF1Q9Y4P9 236 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 UGT2A1Q9Y4X1 527 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 CSNK1G3Q9Y6M4 447 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 UTRNP46939 3433 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 RP1P56715 2156 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 CLUHO75153 1309 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 FLT1P17948 1338 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ADGRA2Q96PE1 1338 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SSU72P8A0A1W2PR75 194 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SH3D21A4FU49 640 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TMEM88BA6NKF7 163 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 HNRNPCL2B2RXH8 293 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 CACNB4O00305 520 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 KPNA5O15131 536 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TP73O15350 636 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ITM2AO43736 263 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 HNRNPCL1O60812 293 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 WBP4O75554 376 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 GCATO75600 419 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PPM1BO75688 479 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 KRT36O76013 467 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SNX4O95219 450 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PGRP06401 933 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 P4HBP07237 508 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 FAM86B2P0C5J1 330 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 MYL2P10916 166 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ATF6P18850 670 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PPARGP37231 505 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ETV1P50549 477 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 NUDT2P50583 147 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 HTRA3P83110 453 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF200P98182 395 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 CSTF3Q12996 717 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 CYLC2Q14093 348 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 GRM4Q14833 912 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 MAPK11Q15759 364 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 AANATQ16613 207 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 YIF1BQ5BJH7 314 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 DCAF15Q66K64 600 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 AADACL2Q6P093 401 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 CYP20A1Q6UW02 462 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 LRRC74BQ6ZQY2 392 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 AKAP14Q86UN6 197 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms