RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 C20orf141Q9NUB4 165 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 KIAA1456Q9P272 454 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 TBC1D14Q9P2M4 693 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 CTNNAL1Q9UBT7 734 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 SLC4A4Q9Y6R1 1079 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 ADGRF5Q8IZF2 1346 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 SCN5AQ14524 2016 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 A0A096LPK6 155 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.56□□□□□ -2
HMGB1P35-201ENST00000503360 A0A1W2PQM1 296 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 PGPEP1LA6NFU8 196 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 NPIPB15A6NHN6 443 aaPredicted RBP2.56□□□□□ -2
HMGB1P35-201ENST00000503360 STMND1H3BQB6 276 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 HSPB6O14558 160 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 TCERG1O14776 1098 aaKnown RBP2.56□□□□□ -2
HMGB1P35-201ENST00000503360 TGFB1I1O43294 461 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 USO1O60763 962 aaKnown RBP2.56□□□□□ -2
HMGB1P35-201ENST00000503360 ATG13O75143 517 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 DDX58O95786 925 aaKnown RBP2.56□□□□□ -2
HMGB1P35-201ENST00000503360 SPARCP09486 303 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 EDN2P20800 178 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 ARL1P40616 181 aaPredicted RBP2.56□□□□□ -2
HMGB1P35-201ENST00000503360 RGS2P41220 211 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 POLD2P49005 469 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 EFNA5P52803 228 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 EIF3BP55884 814 aaKnown RBP2.56□□□□□ -2
HMGB1P35-201ENST00000503360 DCAF7P61962 342 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 RUNX2Q13950 521 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 KCTD2Q14681 263 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 VEPH1Q14D04 833 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 INPP5JQ15735 1006 aaPredicted RBP2.56□□□□□ -2
HMGB1P35-201ENST00000503360 C4orf50Q6ZRC1 276 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 FAM83HQ6ZRV2 1179 aaPredicted RBP2.56□□□□□ -2
HMGB1P35-201ENST00000503360 TMTC3Q6ZXV5 915 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 TMC8Q8IU68 726 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 CAMK1DQ8IU85 385 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 LURAP1LQ8IV03 231 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 ZDHHC23Q8IYP9 409 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 KIAA2013Q8IYS2 634 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 CADM3Q8N126 398 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 ANKRD52Q8NB46 1076 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 KDM1BQ8NB78 822 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 CEP76Q8TAP6 659 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 ETNPPLQ8TBG4 499 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 SNRNP27Q8WVK2 155 aaKnown RBP2.56□□□□□ -2
HMGB1P35-201ENST00000503360 PIP5K1AQ99755 562 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 NUF2Q9BZD4 464 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 LHPPQ9H008 270 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 RANBP17Q9H2T7 1088 aaKnown RBP2.56□□□□□ -2
HMGB1P35-201ENST00000503360 MAP6D1Q9H9H5 199 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 KRT84Q9NSB2 600 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 BLOC1S4Q9NUP1 217 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 SEL1LQ9UBV2 794 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 NRBP1Q9UHY1 535 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 PCDHA12Q9UN75 941 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 PIAS3Q9Y6X2 628 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 KDM3AQ9Y4C1 1321 aa2.56□□□□□ -2
HMGB1P35-201ENST00000503360 IGLV5-39A0A0G2JS06 123 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 TMEM272A0A1B0GTI8 110 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 TYW5A2RUC4 315 aaKnown RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 PI4KAP2A4QPH2 592 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 CBY3A6NI87 242 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 F5H0A9 414 aaPredicted RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 IFNL4K9M1U5 179 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 SNAP23O00161 211 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 LDLRAD4O15165 306 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 ZC3H11AO75152 810 aaKnown RBP eCLIP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 RNASEH2AO75792 299 aaKnown RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 SEC31AO94979 1220 aaKnown RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 NDUFB8O95169 186 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 CLEC3BP05452 202 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 HEXAP06865 529 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 NGFRP08138 427 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 FGF2P09038 288 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 FGF3P11487 239 aaPredicted RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 ENO3P13929 434 aaPredicted RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 ZNF8P17098 575 aaPredicted RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 PTPN2P17706 415 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 CTPS1P17812 591 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 TNFRSF1BP20333 461 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 ICAM3P32942 547 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 TTKP33981 857 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 CPOXP36551 454 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 AVPR1AP37288 418 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 GPR12P47775 334 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 ALDH7A1P49419 539 aaKnown RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 CENPAP49450 140 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 GNAQP50148 359 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 CLCN5P51795 746 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 RARSP54136 660 aaKnown RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 EIF5P55010 431 aaKnown RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 CLDN2P57739 230 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 RPS3AP61247 264 aaKnown RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 CAPSQ13938 189 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 PPP2R5BQ15173 497 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 HIST2H2ACQ16777 129 aaPredicted RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 SLC45A4Q5BKX6 768 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 MANEAQ5SRI9 462 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 NUGGCQ68CJ6 796 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 HIST2H2BCQ6DN03 193 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms