RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 DPYSQ14117 519 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 GSE1Q14687 1217 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 IRF4Q15306 451 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 SMTNL2Q2TAL5 461 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 WSCD2Q2TBF2 565 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 DEFB133Q30KQ1 61 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 TMEM52BQ4KMG9 183 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 PPP1R2P3Q6NXS1 205 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 DENND6BQ8NEG7 585 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 LMX1AQ8TE12 382 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 CXorf40AQ8TE69 158 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 CPLX3Q8WVH0 158 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 ARHGEF26Q96DR7 871 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 CRELD1Q96HD1 420 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 NCAPGQ9BPX3 1015 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 ETNK2Q9NVF9 386 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 TSPAN11A1L157 253 aa16.4■□□□□ 0.22
SCLT1-204ENST00000503215 ARHGAP42A6NI28 874 aa16.4■□□□□ 0.22
SCLT1-204ENST00000503215 TLX3O43711 291 aaPredicted RBP16.4■□□□□ 0.22
SCLT1-204ENST00000503215 PALMO75781 387 aa16.4■□□□□ 0.22
SCLT1-204ENST00000503215 MT-CO3P00414 261 aa16.4■□□□□ 0.22
SCLT1-204ENST00000503215 CELA2BP08218 269 aaPredicted RBP16.4■□□□□ 0.22
SCLT1-204ENST00000503215 DESP17661 470 aa16.4■□□□□ 0.22
SCLT1-204ENST00000503215 AMPD1P23109 780 aa16.4■□□□□ 0.22
SCLT1-204ENST00000503215 UGP2Q16851 508 aa16.4■□□□□ 0.22
SCLT1-204ENST00000503215 SRLQ86TD4 932 aa16.4■□□□□ 0.22
SCLT1-204ENST00000503215 ZSCAN30Q86W11 494 aa16.4■□□□□ 0.22
SCLT1-204ENST00000503215 DCBLD1Q8N8Z6 715 aa16.4■□□□□ 0.22
SCLT1-204ENST00000503215 FAM181AQ8N9Y4 354 aa16.4■□□□□ 0.22
SCLT1-204ENST00000503215 CLCA2Q9UQC9 943 aa16.4■□□□□ 0.22
SCLT1-204ENST00000503215 PCDHB1Q9Y5F3 818 aa16.4■□□□□ 0.22
SCLT1-204ENST00000503215 NEMP2A6NFY4 417 aa16.39■□□□□ 0.21
SCLT1-204ENST00000503215 RIOK3O14730 519 aaKnown RBP16.39■□□□□ 0.21
SCLT1-204ENST00000503215 AQP9O43315 295 aa16.39■□□□□ 0.21
SCLT1-204ENST00000503215 OPA1O60313 960 aa16.39■□□□□ 0.21
SCLT1-204ENST00000503215 XPAP23025 273 aaPredicted RBP16.39■□□□□ 0.21
SCLT1-204ENST00000503215 EIF4A3P38919 411 aaKnown RBP16.39■□□□□ 0.21
SCLT1-204ENST00000503215 E2F1Q01094 437 aa16.39■□□□□ 0.21
SCLT1-204ENST00000503215 TCEA2Q15560 299 aa16.39■□□□□ 0.21
SCLT1-204ENST00000503215 CDKN3Q16667 212 aa16.39■□□□□ 0.21
SCLT1-204ENST00000503215 FIGNQ5HY92 759 aa16.39■□□□□ 0.21
SCLT1-204ENST00000503215 KCTD16Q68DU8 428 aa16.39■□□□□ 0.21
SCLT1-204ENST00000503215 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.39■□□□□ 0.21
SCLT1-204ENST00000503215 CLPBQ9H078 707 aa16.39■□□□□ 0.21
SCLT1-204ENST00000503215 THAP2Q9H0W7 228 aa16.39■□□□□ 0.21
SCLT1-204ENST00000503215 ZWILCHQ9H900 591 aa16.39■□□□□ 0.21
SCLT1-204ENST00000503215 AK5Q9Y6K8 562 aa16.39■□□□□ 0.21
SCLT1-204ENST00000503215 LRRK1Q38SD2 2015 aa16.39■□□□□ 0.21
SCLT1-204ENST00000503215 EIF3CLB5ME19 914 aaKnown RBP16.38■□□□□ 0.21
SCLT1-204ENST00000503215 ALPPL2P10696 532 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 C6P13671 934 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 HCAR3P49019 387 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 LIG3P49916 1009 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 THOP1P52888 689 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 ADKP55263 362 aaKnown RBP16.38■□□□□ 0.21
SCLT1-204ENST00000503215 UBASH3AP57075 661 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 SLC10A7Q0GE19 358 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 RTP5Q14D33 572 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 HS1BP3Q53T59 392 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 TDRD12Q587J7 1177 aaKnown RBP16.38■□□□□ 0.21
SCLT1-204ENST00000503215 PRRT3Q5FWE3 981 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 CDCP2Q5VXM1 449 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 GUSBP11Q6P575 273 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 CPNE8Q86YQ8 564 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 PSTKQ8IV42 348 aaKnown RBP16.38■□□□□ 0.21
SCLT1-204ENST00000503215 PHACTR4Q8IZ21 702 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 HCAR2Q8TDS4 363 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 HSPH1Q92598 858 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 FUBP1Q96AE4 644 aaKnown RBP16.38■□□□□ 0.21
SCLT1-204ENST00000503215 NXPE2Q96DL1 559 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 ZNF641Q96N77 438 aaPredicted RBP16.38■□□□□ 0.21
SCLT1-204ENST00000503215 DCBLD2Q96PD2 775 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 EIF3CQ99613 913 aaKnown RBP16.38■□□□□ 0.21
SCLT1-204ENST00000503215 LRRC61Q9BV99 259 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 SP110Q9HB58 689 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 ATP8A1Q9Y2Q0 1164 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 CSNK1G3Q9Y6M4 447 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 SCINQ9Y6U3 715 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 A0A087X0T9 212 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 CPED1A4D0V7 1026 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 A8MX80 341 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 H3BM21 787 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 PEX11BO96011 259 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 FAM228BP0C875 321 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 MYBL1P10243 752 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 RARAP10276 462 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 ITPKBP27987 946 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 PCK1P35558 622 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 MMP12P39900 470 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 CSNK1DP48730 415 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 IL10RBQ08334 325 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 RALGDSQ12967 914 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 INPP5AQ14642 412 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 LRRC14Q15048 493 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 FAXCQ5TGI0 409 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 CRTC1Q6UUV9 634 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 POLNQ7Z5Q5 900 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 PDZD3Q86UT5 571 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 PGBD5Q8N414 524 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 PLA2G15Q8NCC3 412 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms