RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 CMKLR1Q99788 373 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 PDCL3Q9H2J4 239 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 GEMIN8Q9NWZ8 242 aaKnown RBP14.1□□□□□ -0.15
CCDC58-207ENST00000498466 FOXJ2Q9P0K8 574 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 ANKMY1Q9P2S6 941 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 PPARGC1AQ9UBK2 798 aaKnown RBP14.1□□□□□ -0.15
CCDC58-207ENST00000498466 CXorf51AA0A1B0GTR3 108 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 A0A1W2PQC6 194 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 FAM170AA1A519 330 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 WT1P19544 449 aaPredicted RBP14.09□□□□□ -0.15
CCDC58-207ENST00000498466 BMP6P22004 513 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 ETV5P41161 510 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 SRP54P61011 504 aaKnown RBP14.09□□□□□ -0.15
CCDC58-207ENST00000498466 ZFP36L1Q07352 338 aaKnown RBP14.09□□□□□ -0.15
CCDC58-207ENST00000498466 PAK1Q13153 545 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 NFATC4Q14934 902 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 CLCA4Q14CN2 919 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 RWDD4Q6NW29 188 aaKnown RBP14.09□□□□□ -0.15
CCDC58-207ENST00000498466 GBP6Q6ZN66 633 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 TMEM35BQ8NCS4 154 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 HTR3CQ8WXA8 447 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 C18orf8Q96DM3 657 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 CFAP57Q96MR6 1250 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 NDFIP2Q9NV92 336 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 KLQ9UEF7 1012 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 DNAI1Q9UI46 699 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 COQ6Q9Y2Z9 468 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 RNF215Q9Y6U7 377 aa14.09□□□□□ -0.15
CCDC58-207ENST00000498466 C9orf172C9J069 976 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 FGFR1OPO95684 399 aaKnown RBP14.08□□□□□ -0.16
CCDC58-207ENST00000498466 TNFP01375 233 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 PNMA6AP0CW24 399 aaPredicted RBP14.08□□□□□ -0.16
CCDC58-207ENST00000498466 GLB1P16278 677 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 XPAP23025 273 aaPredicted RBP14.08□□□□□ -0.16
CCDC58-207ENST00000498466 FLT3P36888 993 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 SCNN1AP37088 669 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 RAD51Q06609 339 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 MORC3Q14149 939 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 UBAP2LQ14157 1087 aaKnown RBP14.08□□□□□ -0.16
CCDC58-207ENST00000498466 EXOC3L4Q17RC7 722 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 PHF19Q5T6S3 580 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 TMEM164Q5U3C3 297 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 DTX1Q86Y01 620 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 ZNF354CQ86Y25 554 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 XYLT1Q86Y38 959 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 PTRH1Q86Y79 214 aaKnown RBP14.08□□□□□ -0.16
CCDC58-207ENST00000498466 GPR156Q8NFN8 814 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 ATL2Q8NHH9 583 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 JPH3Q8WXH2 748 aaPredicted RBP14.08□□□□□ -0.16
CCDC58-207ENST00000498466 VOPP1Q96AW1 172 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 GDAP1L1Q96MZ0 367 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 FUCA2Q9BTY2 467 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 APOOQ9BUR5 198 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 APPL1Q9UKG1 709 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 OR1A2Q9Y585 309 aa14.08□□□□□ -0.16
CCDC58-207ENST00000498466 GOLGA8SH3BPF8 625 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 BIN1O00499 593 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 RAMP2O60895 175 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 TIMP2P16035 220 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 CD82P27701 267 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 CLCN1P35523 988 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 GABRB2P47870 512 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 MAPKAPK2P49137 400 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 ARHGEF7Q14155 803 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 INPP5AQ14642 412 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 WSCD2Q2TBF2 565 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 CERCAMQ5T4B2 595 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 NYAP1Q6ZVC0 841 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 SPRED1Q7Z699 444 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 TAF8Q7Z7C8 310 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 FAM46DQ8NEK8 389 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 RBM15Q96T37 977 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCDC58-207ENST00000498466 TTYH3Q9C0H2 523 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 MAGEH1Q9H213 219 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 AKAP7Q9P0M2 348 aaPredicted RBP14.07□□□□□ -0.16
CCDC58-207ENST00000498466 LRIT1Q9P2V4 623 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 OR12D3Q9UGF7 316 aa14.07□□□□□ -0.16
CCDC58-207ENST00000498466 AJAP1Q9UKB5 411 aaPredicted RBP14.07□□□□□ -0.16
CCDC58-207ENST00000498466 B4DGG1 531 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 FOXN3O00409 490 aaPredicted RBP14.06□□□□□ -0.16
CCDC58-207ENST00000498466 BUB1O43683 1085 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 TMCC1O94876 653 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 IGSF6O95976 241 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 PCCBP05166 539 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 PNLIPP16233 465 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 RHOQP17081 205 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 PON1P27169 355 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 ATP11AP98196 1134 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 ELP6Q0PNE2 266 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 MAP9Q49MG5 647 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 TMEM52BQ4KMG9 183 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 C2CD6Q53TS8 623 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 TRNP1Q6NT89 227 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 BORAQ6PGQ7 559 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 TMPRSS9Q7Z410 1059 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 BNIPLQ7Z465 357 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 NLRP14Q86W24 1093 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 SLITRK4Q8IW52 837 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 NETO2Q8NC67 525 aa14.06□□□□□ -0.16
CCDC58-207ENST00000498466 ZNF564Q8TBZ8 553 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms