RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 CASP14P31944 242 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 IGFALSP35858 605 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 RGRP47804 291 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 CSNK1DP48730 415 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 PFN3P60673 137 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 HNRNPKP61978 463 aaKnown RBP eCLIP8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 DAB2P98082 770 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 IL10RBQ08334 325 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 ILKQ13418 452 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 CAMK2BQ13554 666 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 PTK2BQ14289 1009 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 FZD2Q14332 565 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 RFTN1Q14699 578 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 DPYSL2Q16555 572 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 UGP2Q16851 508 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 SKOR2Q2VWA4 1001 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 PROX2Q3B8N5 592 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 TMEM52BQ4KMG9 183 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 BOLA3Q53S33 107 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 ZNF542PQ5EBM4 170 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 ALKBH5Q6P6C2 394 aaKnown RBP8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 BRAT1Q6PJG6 821 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 TMCO3Q6UWJ1 677 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 ARHGAP36Q6ZRI8 547 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 POLNQ7Z5Q5 900 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 SRLQ86TD4 932 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 MARCH9Q86YJ5 346 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 LZTR1Q8N653 840 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 NIPA2Q8N8Q9 360 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 TSEN2Q8NCE0 465 aaKnown RBP8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 MDM1Q8TC05 714 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 HSPH1Q92598 858 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 CENPTQ96BT3 561 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 BTBD6Q96KE9 485 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 ZNF641Q96N77 438 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 WRAP53Q9BUR4 548 aaKnown RBP8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 NUP85Q9BW27 656 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 ATP13A3Q9H7F0 1226 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 CAAP1Q9H8G2 361 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 NLGN3Q9NZ94 848 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 IP6K2Q9UHH9 426 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 ANAPC7Q9UJX3 599 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 COL27A1Q8IZC6 1860 aaPredicted RBP8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 WDFY3Q8IZQ1 3526 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 USP24Q9UPU5 2620 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 TRABD2BA6NFA1 517 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 MYO1FO00160 1098 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 TAF4O00268 1085 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 RIOK3O14730 519 aaKnown RBP8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 SCAMP1O15126 338 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 BUB1BO60566 1050 aaPredicted RBP8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 CYP1A2P05177 515 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 GIMD1P0DJR0 217 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 RARAP10276 462 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 JUPP14923 745 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 NME1P15531 152 aaKnown RBP8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 AMPD1P23109 780 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 SERPINA4P29622 427 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 SCNN1BP51168 640 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 RENBPP51606 427 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 THOP1P52888 689 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 CLDN6P56747 220 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 YPEL5P62699 121 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 BCL2L1Q07817 233 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 NSUN2Q08J23 767 aaKnown RBP eCLIP8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 LBRQ14739 615 aaKnown RBP8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 CCDC122Q5T0U0 273 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 HES3Q5TGS1 186 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 TMCO4Q5TGY1 634 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 ERAP2Q6P179 960 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 KDM7AQ6ZMT4 941 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 CAMK1DQ8IU85 385 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 TP53INP2Q8IXH6 220 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 EFCAB3Q8N7B9 438 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 PAF1Q8N7H5 531 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 TP53I13Q8NBR0 393 aaPredicted RBP8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 ZNF548Q8NEK5 533 aaPredicted RBP8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 BTN2A2Q8WVV5 523 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 TEKT4Q8WW24 435 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 CSPG4P5Q96PW8 444 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 DUSP23Q9BVJ7 150 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 XPO4Q9C0E2 1151 aaKnown RBP8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 PCDH12Q9NPG4 1184 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 MBNL1Q9NR56 388 aaKnown RBP8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 COQ6Q9Y2Z9 468 aa8.55□□□□□ -1.04
HMGXB4-207ENST00000498212 K7ESM1 405 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 MUSKO15146 869 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 AQP9O43315 295 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 CBFA2T2O43439 604 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 NEBLO76041 1014 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 PRKCGP05129 697 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 CKMT1AP12532 417 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 C6P13671 934 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 JUNDP17535 347 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 HNRNPH3P31942 346 aaKnown RBP8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 SERPINB6P35237 376 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 EIF4A3P38919 411 aaKnown RBP8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 MMP12P39900 470 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms