RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 TKTP29401 623 aaKnown RBP3.02□□□□□ -1.93
RIF1-212ENST00000498041 HOXA11P31270 313 aaPredicted RBP3.02□□□□□ -1.93
RIF1-212ENST00000498041 PSMC2P35998 433 aaKnown RBP3.02□□□□□ -1.93
RIF1-212ENST00000498041 THPOP40225 353 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 LIFRP42702 1097 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 MAPK9P45984 424 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 BLKP51451 505 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 VAMP2P63027 116 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 ABATP80404 500 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 EGR4Q05215 589 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 SLC18A2Q05940 514 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 Q0VFX4 171 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 IDI1Q13907 227 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 NFIL3Q16649 462 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 ZNF284Q2VY69 593 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 SLC4A8Q2Y0W8 1093 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 GORABQ5T7V8 394 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 ATG9BQ674R7 924 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 RETSATQ6NUM9 610 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 TRILQ7L0X0 811 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 LRRC8DQ7L1W4 858 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 CHD1LQ86WJ1 897 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 TNIP2Q8NFZ5 429 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 GDPD5Q8WTR4 605 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 MIB2Q96AX9 1013 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 RNF183Q96D59 192 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 ZNF479Q96JC4 524 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 ZPBPQ9BS86 351 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 PHF7Q9BWX1 381 aaPredicted RBP3.02□□□□□ -1.93
RIF1-212ENST00000498041 NPFFR1Q9GZQ6 430 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 MVB12BQ9H7P6 319 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 SPATS2LQ9NUQ6 558 aaKnown RBP3.02□□□□□ -1.93
RIF1-212ENST00000498041 RRN3Q9NYV6 651 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 STK26Q9P289 416 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 WNT16Q9UBV4 365 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 CNOT7Q9UIV1 285 aaKnown RBP3.02□□□□□ -1.93
RIF1-212ENST00000498041 PCDHGB5Q9Y5G0 923 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 INO80Q9ULG1 1556 aaPredicted RBP3.02□□□□□ -1.93
RIF1-212ENST00000498041 DIP2CQ9Y2E4 1556 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 ATP7AQ04656 1500 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 ZFYVE16Q7Z3T8 1539 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 ATP10AO60312 1499 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 KIAA1107Q9UPP5 1409 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 UNC13BO14795 1591 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 MAST1Q9Y2H9 1570 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 CHL1O00533 1208 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 EBAG9O00559 213 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 NCAM2O15394 837 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 ITM2AO43736 263 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 SOX30O94993 753 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 GLUD1P00367 558 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 POLBP06746 335 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 DCTDP32321 178 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 TTKP33981 857 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 GLUD2P49448 558 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 PCYT1AP49585 367 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 NUDT6P53370 316 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 YWHAZP63104 245 aaKnown RBP3.01□□□□□ -1.93
RIF1-212ENST00000498041 CRYZQ08257 329 aaKnown RBP3.01□□□□□ -1.93
RIF1-212ENST00000498041 FAM27E3Q08E93 113 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 TRAF2Q12933 501 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 TRPC3Q13507 836 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 ERV3-1Q14264 604 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 HNF4GQ14541 408 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 LPIN1Q14693 890 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 PLEKHO1Q53GL0 409 aaPredicted RBP3.01□□□□□ -1.93
RIF1-212ENST00000498041 TDRD12Q587J7 1177 aaKnown RBP3.01□□□□□ -1.93
RIF1-212ENST00000498041 DCAF6Q58WW2 860 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 NAA35Q5VZE5 725 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 C17orf99Q6UX52 265 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 MON1AQ86VX9 555 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 DENND6AQ8IWF6 608 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 EXOC8Q8IYI6 725 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 MIGA1Q8NAN2 632 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 ELP5Q8TE02 316 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 RUFY2Q8WXA3 655 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 PHF21BQ96EK2 531 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 EYA3Q99504 573 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 MSTO1Q9BUK6 570 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 GPR63Q9BZJ6 419 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 CDT1Q9H211 546 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 SLC32A1Q9H598 525 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 MYH16Q9H6N6 1097 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 IL1RAPL1Q9NZN1 696 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 HSF4Q9ULV5 492 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 LRRFIP2Q9Y608 721 aaKnown RBP3.01□□□□□ -1.93
RIF1-212ENST00000498041 SPHKAPQ2M3C7 1700 aa3.01□□□□□ -1.93
RIF1-212ENST00000498041 ROCK1Q13464 1354 aa3□□□□□ -1.93
RIF1-212ENST00000498041 TONSLQ96HA7 1378 aa3□□□□□ -1.93
RIF1-212ENST00000498041 DISP3Q9P2K9 1392 aa3□□□□□ -1.93
RIF1-212ENST00000498041 PLEKHH1Q9ULM0 1364 aa3□□□□□ -1.93
RIF1-212ENST00000498041 SYNMO15061 1565 aa3□□□□□ -1.93
RIF1-212ENST00000498041 KIF7Q2M1P5 1343 aa3□□□□□ -1.93
RIF1-212ENST00000498041 ARID4BQ4LE39 1312 aaPredicted RBP3□□□□□ -1.93
RIF1-212ENST00000498041 KDM5DQ9BY66 1539 aa3□□□□□ -1.93
RIF1-212ENST00000498041 CCDC196A0A1B0GTZ2 297 aa3□□□□□ -1.93
RIF1-212ENST00000498041 TYW5A2RUC4 315 aaKnown RBP3□□□□□ -1.93
RIF1-212ENST00000498041 PABPN1LA6NDY0 278 aaKnown RBP3□□□□□ -1.93
RIF1-212ENST00000498041 RRN3P2A6NIE6 340 aa3□□□□□ -1.93
RIF1-212ENST00000498041 KDM4EB2RXH2 506 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 734.6 ms