RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 GRM3Q14832 879 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 MAPRE2Q15555 327 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 ZNF773Q6PK81 442 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 PLEKHG7Q6ZR37 379 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 FAM183BPQ6ZVS7 135 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 R3HCC1LQ7Z5L2 792 aaKnown RBP13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 DEPDC4Q8N2C3 294 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 HTR3CQ8WXA8 447 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 ZNF486Q96H40 463 aaPredicted RBP13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 SEZ6LQ9BYH1 1024 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 RNF103O00237 685 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 TRIM24O15164 1050 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 DGAT1O75907 488 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 KRT8P05787 483 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 MBL2P11226 248 aaPredicted RBP13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 STX1BP61266 288 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 LRP8Q14114 963 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 CCDC14Q49A88 953 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 HHIPL2Q6UWX4 724 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 GATAD2AQ86YP4 633 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 SLC41A1Q8IVJ1 513 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 FSTL5Q8N475 847 aaPredicted RBP13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 OR7A2PQ8NGA2 310 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 CENPNQ96H22 339 aaPredicted RBP13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 TDRD1Q9BXT4 1180 aaKnown RBP13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 NEK6Q9HC98 313 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 UBP1Q9NZI7 540 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 VTI1BQ9UEU0 232 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 MAGED1Q9Y5V3 778 aaPredicted RBP13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 SNX9Q9Y5X1 595 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 ILVBLA1L0T0 632 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 DDHD2O94830 711 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 EDN1P05305 212 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 CES1P23141 567 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 DUOXA2Q1HG44 320 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 VPS26BQ4G0F5 336 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 NT5DC4Q86YG4 428 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 ANKRD13AQ8IZ07 590 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 MFSD2AQ8NA29 543 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 EXT2Q93063 718 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 PHF21BQ96EK2 531 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 MAELQ96JY0 434 aaKnown RBP13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 VRTNQ9H8Y1 702 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 TRIM39Q9HCM9 518 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 TRPV5Q9NQA5 729 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 MID2Q9UJV3 735 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 SNX5Q9Y5X3 404 aa13.16□□□□□ -0.3
GAPVD1-220ENST00000497580 A8MV72 311 aaPredicted RBP13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 TNFRSF10AO00220 468 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 TBX1O43435 398 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 DLX3O60479 287 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 ADSLP30566 484 aaPredicted RBP13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 SHMT2P34897 504 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 ECT2LQ008S8 904 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 EMC2Q15006 297 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 CLEC6AQ6EIG7 209 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 ITIH5Q86UX2 942 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 LSMEM2Q8N112 164 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 ADAMTS16Q8TE57 1224 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 ZFYVE19Q96K21 471 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 KLHL8Q9P2G9 620 aaPredicted RBP13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 BOLA1Q9Y3E2 137 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 TRPC5OSA6NMA1 111 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 GCATO75600 419 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 LYPLA2O95372 231 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 BMP4P12644 408 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 CDH1P12830 882 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 HNRNPFP52597 415 aaKnown RBP13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 NSUN2Q08J23 767 aaKnown RBP eCLIP13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 TRAP1Q12931 704 aaKnown RBP13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 PPP1R8Q12972 351 aaKnown RBP13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 LAMC2Q13753 1193 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 VPS72Q15906 364 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 CYBRD1Q53TN4 286 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 ZNF667Q5HYK9 610 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 PRAMEF18Q5VWM3 479 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 SLFN12LQ6IEE8 588 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 CNSTQ6PJW8 725 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 ZYG11AQ6WRX3 759 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 CYP2U1Q7Z449 544 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 PYROXD2Q8N2H3 581 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 PDPRQ8NCN5 879 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 DNAJB14Q8TBM8 379 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 RNF145Q96MT1 663 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 NTPCRQ9BSD7 190 aaKnown RBP13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 TRIM15Q9C019 465 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 POMKQ9H5K3 350 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 GIMAP4Q9NUV9 329 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 GGA3Q9NZ52 723 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 ALDH1A2O94788 518 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 INMTO95050 263 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 VBP1P61758 197 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 TGFB2P61812 414 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 CNTN2Q02246 1040 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 E2F2Q14209 437 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 TMTC4Q5T4D3 741 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 CYP4V2Q6ZWL3 525 aaPredicted RBP13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 PAGE2Q7Z2X7 111 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 STK32CQ86UX6 486 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms