RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 ZKSCAN2Q63HK3 967 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 LRRC8EQ6NSJ5 796 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 NEK10Q6ZWH5 1172 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 PATL1Q86TB9 770 aaKnown RBP4.99□□□□□ -1.61
VPS36-206ENST00000497149 TDRPQ86YL5 185 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 NGEFQ8N5V2 710 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 PERPQ96FX8 193 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 HMCESQ96FZ2 354 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 URB1-AS1Q96HZ7 61 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 VCPIP1Q96JH7 1222 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 SIN3AQ96ST3 1273 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 MXRA8Q9BRK3 442 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 DIAPH3Q9NSV4 1193 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 LSM4Q9Y4Z0 139 aaKnown RBP4.99□□□□□ -1.61
VPS36-206ENST00000497149 CAPN7Q9Y6W3 813 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 A3GALT2U3KPV4 340 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 BECN2A8MW95 431 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 USP17L23D6RBM5 183 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 MS4A18H0YCH9 400 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 SEC14L5O43304 696 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 LDB2O43679 373 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 KLK8O60259 260 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 CCNDBP1O95273 360 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 CYP1A2P05177 515 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 CDK4P11802 303 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 MYF6P23409 242 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 THPOP40225 353 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 P2RX3P56373 397 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 HDAC4P56524 1084 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 OLR1P78380 273 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 PPATQ06203 517 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 TRAF1Q13077 416 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 GPR18Q14330 331 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 ARHGEF6Q15052 776 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 LEXMQ3ZCV2 418 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 SNX30Q5VWJ9 437 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 TRILQ7L0X0 811 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 ZNF367Q7RTV3 350 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 PXKQ7Z7A4 578 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 PALB2Q86YC2 1186 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 ADSSL1Q8N142 457 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 ZCCHC9Q8N567 271 aaKnown RBP4.98□□□□□ -1.61
VPS36-206ENST00000497149 GPT2Q8TD30 523 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 INTS12Q96CB8 462 aaKnown RBP4.98□□□□□ -1.61
VPS36-206ENST00000497149 PABPC5Q96DU9 382 aaKnown RBP4.98□□□□□ -1.61
VPS36-206ENST00000497149 CHCHD6Q9BRQ6 235 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 CATSPERBQ9H7T0 1116 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 PLAC1Q9HBJ0 212 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 KRCC1Q9NPI7 259 aaPredicted RBP4.98□□□□□ -1.61
VPS36-206ENST00000497149 SMYD2Q9NRG4 433 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 KRT84Q9NSB2 600 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 HAO1Q9UJM8 370 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 MKLN1Q9UL63 735 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 KCNE2Q9Y6J6 123 aa4.98□□□□□ -1.61
VPS36-206ENST00000497149 UTYO14607 1347 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 RPS10-NUDT3A0A1W2PQS6 291 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 EIF3CLB5ME19 914 aaKnown RBP4.97□□□□□ -1.61
VPS36-206ENST00000497149 SNAP23O00161 211 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 LIASO43766 372 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 CBSLP0DN79 551 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 LAMP2P13473 410 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 HOXB2P14652 356 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 AGAP20933 346 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 CBSP35520 551 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 CASP2P42575 452 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 RFX5P48382 616 aaPredicted RBP4.97□□□□□ -1.61
VPS36-206ENST00000497149 ITGADQ13349 1161 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 EIF4A2Q14240 407 aaKnown RBP4.97□□□□□ -1.61
VPS36-206ENST00000497149 DCAF6Q58WW2 860 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 Q6ZSV7 163 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 Q6ZTK2 550 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 NOXA1Q86UR1 476 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 MB21D2Q8IYB1 491 aaPredicted RBP4.97□□□□□ -1.61
VPS36-206ENST00000497149 PARP16Q8N5Y8 322 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 PSPC1Q8WXF1 523 aaKnown RBP4.97□□□□□ -1.61
VPS36-206ENST00000497149 GTF3C6Q969F1 213 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 OTULINQ96BN8 352 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 APOLD1Q96LR9 279 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 MAP7D2Q96T17 732 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 STRA6Q9BX79 667 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 PLEKHA5Q9HAU0 1116 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 SCPEP1Q9HB40 452 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 TBC1D22BQ9NU19 505 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 MAP3K20Q9NYL2 800 aaKnown RBP4.97□□□□□ -1.61
VPS36-206ENST00000497149 RNF7Q9UBF6 113 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 NFE2L3Q9Y4A8 694 aa4.97□□□□□ -1.61
VPS36-206ENST00000497149 SRPRBQ9Y5M8 271 aaKnown RBP4.97□□□□□ -1.61
VPS36-206ENST00000497149 PCSK5Q92824 1860 aa4.96□□□□□ -1.61
VPS36-206ENST00000497149 ZBED4O75132 1171 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 RNASEH2AO75792 299 aaKnown RBP4.96□□□□□ -1.62
VPS36-206ENST00000497149 MTA2O94776 668 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 RGS11O94810 467 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 SCGB1D1O95968 90 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 LCATP04180 440 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 HOXB5P09067 269 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 ETFAP13804 333 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 ITGAXP20702 1163 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 NFKBIAP25963 317 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 MAPK4P31152 587 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 CDAP32320 146 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms