RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 HCAR3P49019 387 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 ARSEP51690 589 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 RAD51Q06609 339 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 IL10RBQ08334 325 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 TRIM14Q14142 442 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 FZD2Q14332 565 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 MESDQ14696 234 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 LBRQ14739 615 aaKnown RBP12.33□□□□□ -0.44
HDLBP-246ENST00000496569 ACAP1Q15027 740 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 BOLA3Q53S33 107 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 KYAT3Q6YP21 454 aaKnown RBP12.33□□□□□ -0.44
HDLBP-246ENST00000496569 RBFAQ8N0V3 343 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 SLC25A45Q8N413 288 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.33□□□□□ -0.44
HDLBP-246ENST00000496569 CXorf40AQ8TE69 158 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 TEKT4Q8WW24 435 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 CTNNBL1Q8WYA6 563 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-246ENST00000496569 RAB7BQ96AH8 199 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 EIF3CQ99613 913 aaKnown RBP12.33□□□□□ -0.44
HDLBP-246ENST00000496569 CDC6Q99741 560 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 CPEB1Q9BZB8 566 aaKnown RBP12.33□□□□□ -0.44
HDLBP-246ENST00000496569 SUV39H2Q9H5I1 410 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 ERVMER34-1Q9H9K5 563 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 DNAJC28Q9NX36 388 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 KLF15Q9UIH9 416 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 TFR2Q9UP52 801 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 HYOU1Q9Y4L1 999 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 NEUROG3Q9Y4Z2 214 aa12.33□□□□□ -0.44
HDLBP-246ENST00000496569 COL27A1Q8IZC6 1860 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-246ENST00000496569 CELSR3Q9NYQ7 3312 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 PKD1L2Q7Z442 2459 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 A0A0U1RQS6 177 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 TSPAN11A1L157 253 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 TSPAN6O43657 245 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 DFNA5O60443 496 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 MAFKO60675 156 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 PIAS2O75928 621 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 TM7SF2O76062 418 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 H2AFZP0C0S5 128 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 GIMD1P0DJR0 217 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 C6P13671 934 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 XPAP23025 273 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-246ENST00000496569 DGKAP23743 735 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 SCNN1BP51168 640 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 OVGP1Q12889 678 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 RALGDSQ12967 914 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 SGCGQ13326 291 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 PDE1CQ14123 709 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-246ENST00000496569 DPYSL3Q14195 570 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 ZNF235Q14590 738 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 IRF4Q15306 451 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 INAVAQ3KP66 663 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 TMCO4Q5TGY1 634 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 NCBP2-AS2Q69YL0 99 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 H2AFVQ71UI9 128 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 OXR1Q8N573 874 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 ATPAF2Q8N5M1 289 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 TP53I13Q8NBR0 393 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-246ENST00000496569 PCDH19Q8TAB3 1148 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 SMIM14Q96QK8 99 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 NHEJ1Q9H9Q4 299 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-246ENST00000496569 GPR27Q9NS67 375 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 DKK3Q9UBP4 350 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 MSRB2Q9Y3D2 182 aa12.32□□□□□ -0.44
HDLBP-246ENST00000496569 ZFC3H1O60293 1989 aaKnown RBP12.32□□□□□ -0.44
HDLBP-246ENST00000496569 SSU72P8A0A1W2PR75 194 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 FPGTO14772 594 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 SIGLEC6O43699 453 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 MAGEC1O60732 1142 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 DKK1O94907 266 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 TRIM16O95361 564 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 PROS1P07225 676 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 TMEM253P0C7T8 217 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 TNNT1P13805 278 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 MMP12P39900 470 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 ACADVLP49748 655 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 PFN3P60673 137 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 EIF2B5Q13144 721 aaKnown RBP12.31□□□□□ -0.44
HDLBP-246ENST00000496569 TBX2Q13207 712 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-246ENST00000496569 UGP2Q16851 508 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 TMEM52BQ4KMG9 183 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 CFAP58Q5T655 872 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 KCTD16Q68DU8 428 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 PAF1Q8N7H5 531 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 SLC35G2Q8TBE7 412 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 PDCD6IPQ8WUM4 868 aaKnown RBP12.31□□□□□ -0.44
HDLBP-246ENST00000496569 ZCCHC14Q8WYQ9 949 aaKnown RBP12.31□□□□□ -0.44
HDLBP-246ENST00000496569 RAPGEF5Q92565 580 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 FUBP1Q96AE4 644 aaKnown RBP12.31□□□□□ -0.44
HDLBP-246ENST00000496569 CENPTQ96BT3 561 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 TRIM5Q9C035 493 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 RBSNQ9H1K0 784 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 GOLPH3Q9H4A6 298 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 ATP13A3Q9H7F0 1226 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 ZNHIT6Q9NWK9 470 aaKnown RBP12.31□□□□□ -0.44
HDLBP-246ENST00000496569 DONSONQ9NYP3 566 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 SEPT3Q9UH03 358 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 ATP8A1Q9Y2Q0 1164 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 PCDHGC4Q9Y5F7 938 aa12.31□□□□□ -0.44
HDLBP-246ENST00000496569 HS3ST3A1Q9Y663 406 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms