RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 HOXA6P31267 233 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 ADCY8P40145 1251 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 LMAN1P49257 510 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 RPL26P61254 145 aaKnown RBP21.94■■□□□ 1.1
C9orf3-222ENST00000496567 CDK18Q07002 472 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 USP30Q70CQ3 517 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 KBTBD6Q86V97 674 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 IPMKQ8NFU5 416 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 ARRDC3Q96B67 414 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 FEM1CQ96JP0 617 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 MRGPRX2Q96LB1 330 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 ADGRE3Q9BY15 652 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 HDAC8Q9BY41 377 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 LRRC40Q9H9A6 602 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 RPL26L1Q9UNX3 145 aaKnown RBP21.94■■□□□ 1.1
C9orf3-222ENST00000496567 CHKBQ9Y259 395 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 NCKAP1Q9Y2A7 1128 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 C16orf96A6NNT2 1141 aa21.93■■□□□ 1.1
C9orf3-222ENST00000496567 FZD6O60353 706 aa21.93■■□□□ 1.1
C9orf3-222ENST00000496567 AP2A1O95782 977 aa21.93■■□□□ 1.1
C9orf3-222ENST00000496567 EPOP01588 193 aa21.93■■□□□ 1.1
C9orf3-222ENST00000496567 NFKBIAP25963 317 aa21.93■■□□□ 1.1
C9orf3-222ENST00000496567 TMEM31Q5JXX7 168 aa21.93■■□□□ 1.1
C9orf3-222ENST00000496567 CCDC70Q6NSX1 233 aa21.93■■□□□ 1.1
C9orf3-222ENST00000496567 FBXL19Q6PCT2 694 aa21.93■■□□□ 1.1
C9orf3-222ENST00000496567 ERN2Q76MJ5 926 aaKnown RBP21.93■■□□□ 1.1
C9orf3-222ENST00000496567 NDUFAF2Q8N183 169 aa21.93■■□□□ 1.1
C9orf3-222ENST00000496567 PDCD7Q8N8D1 485 aaKnown RBP21.93■■□□□ 1.1
C9orf3-222ENST00000496567 GANCQ8TET4 914 aa21.93■■□□□ 1.1
C9orf3-222ENST00000496567 FBXL12Q9NXK8 326 aa21.93■■□□□ 1.1
C9orf3-222ENST00000496567 ZNF217O75362 1048 aa21.92■■□□□ 1.1
C9orf3-222ENST00000496567 CPP00450 1065 aa21.92■■□□□ 1.1
C9orf3-222ENST00000496567 XPAP23025 273 aaPredicted RBP21.92■■□□□ 1.1
C9orf3-222ENST00000496567 SUOXP51687 545 aa21.92■■□□□ 1.1
C9orf3-222ENST00000496567 NEK3P51956 506 aa21.92■■□□□ 1.1
C9orf3-222ENST00000496567 METAP1P53582 386 aa21.92■■□□□ 1.1
C9orf3-222ENST00000496567 EPHB1P54762 984 aa21.92■■□□□ 1.1
C9orf3-222ENST00000496567 KCTD19Q17RG1 926 aaPredicted RBP21.92■■□□□ 1.1
C9orf3-222ENST00000496567 GLE1Q53GS7 698 aaKnown RBP21.92■■□□□ 1.1
C9orf3-222ENST00000496567 KCTD11Q693B1 232 aa21.92■■□□□ 1.1
C9orf3-222ENST00000496567 PARS2Q7L3T8 475 aaKnown RBP21.92■■□□□ 1.1
C9orf3-222ENST00000496567 HDDC3Q8N4P3 179 aa21.92■■□□□ 1.1
C9orf3-222ENST00000496567 AADATQ8N5Z0 425 aa21.92■■□□□ 1.1
C9orf3-222ENST00000496567 NOA1Q8NC60 698 aaKnown RBP21.92■■□□□ 1.1
C9orf3-222ENST00000496567 TRIM51Q9BSJ1 452 aa21.92■■□□□ 1.1
C9orf3-222ENST00000496567 RAB17Q9H0T7 212 aa21.92■■□□□ 1.1
C9orf3-222ENST00000496567 ITM2CQ9NQX7 267 aa21.92■■□□□ 1.1
C9orf3-222ENST00000496567 EIF2B3Q9NR50 452 aaKnown RBP21.92■■□□□ 1.1
C9orf3-222ENST00000496567 PHTF1Q9UMS5 762 aa21.92■■□□□ 1.1
C9orf3-222ENST00000496567 UTP11Q9Y3A2 253 aaKnown RBP21.92■■□□□ 1.1
C9orf3-222ENST00000496567 ZDBF2Q9HCK1 2354 aa21.92■■□□□ 1.1
C9orf3-222ENST00000496567 LOC285095A0A1B0GVY8 99 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 A0A1W2PP55 124 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 EFCAB8A8MWE9 144 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 RNASEH2AO75792 299 aaKnown RBP21.91■■□□□ 1.1
C9orf3-222ENST00000496567 NDST3O95803 873 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 APRTP07741 180 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 PDHA1P08559 390 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 DRD3P35462 400 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 CDK16Q00536 496 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 CNTN1Q12860 1018 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 NAPEPLDQ6IQ20 393 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 KDELC2Q7Z4H8 507 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 PCGF5Q86SE9 256 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 TTC7BQ86TV6 843 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 RAB7BQ96AH8 199 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 TRIB3Q96RU7 358 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 ERP44Q9BS26 406 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 LRRC1Q9BTT6 524 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 USP36Q9P275 1121 aaKnown RBP21.91■■□□□ 1.1
C9orf3-222ENST00000496567 FBXO4Q9UKT5 387 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 FZD4Q9ULV1 537 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 CCDC163A0A0D9SF12 145 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 NDC80O14777 642 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 PRLP01236 227 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 HLA-DPA1P20036 260 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 P2RY2P41231 377 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 TPMTP51580 245 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 NUBP1P53384 320 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 MRPS25P82663 173 aaKnown RBP21.91■■□□□ 1.1
C9orf3-222ENST00000496567 UGP2Q16851 508 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 LINC00523Q86TU6 105 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 PIH1D2Q8WWB5 315 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 RMDN1Q96DB5 314 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 TBL1YQ9BQ87 522 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 FICDQ9BVA6 458 aa21.91■■□□□ 1.1
C9orf3-222ENST00000496567 UPK3BL1B0FP48 263 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 UPK3BL2E5RIL1 263 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 AXIN1O15169 862 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 SLC7A4O43246 635 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 SUN1O94901 812 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 ADRB3P13945 408 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 TIMP2P16035 220 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 TPSB2P20231 275 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 ADRA1AP35348 466 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 MAGEA6P43360 314 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 GRIA4P48058 902 aa21.9■■□□□ 1.1
C9orf3-222ENST00000496567 PXNP49023 591 aaPredicted RBP21.9■■□□□ 1.1
C9orf3-222ENST00000496567 CSTF1Q05048 431 aaKnown RBP21.9■■□□□ 1.1
C9orf3-222ENST00000496567 TPSAB1Q15661 275 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms