RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 KYAT3Q6YP21 454 aaKnown RBP12.44□□□□□ -0.42
TRIM59-207ENST00000496222 RAB44Q7Z6P3 723 aaPredicted RBP12.44□□□□□ -0.42
TRIM59-207ENST00000496222 TEX26Q8N6G2 289 aa12.44□□□□□ -0.42
TRIM59-207ENST00000496222 RHBDD1Q8TEB9 315 aa12.44□□□□□ -0.42
TRIM59-207ENST00000496222 SETD7Q8WTS6 366 aaKnown RBP12.44□□□□□ -0.42
TRIM59-207ENST00000496222 RFFLQ8WZ73 363 aa12.44□□□□□ -0.42
TRIM59-207ENST00000496222 CNTNAP3BQ96NU0 1288 aa12.44□□□□□ -0.42
TRIM59-207ENST00000496222 MGME1Q9BQP7 344 aa12.44□□□□□ -0.42
TRIM59-207ENST00000496222 ZNF670Q9BS34 389 aa12.44□□□□□ -0.42
TRIM59-207ENST00000496222 TMEM121BQ9BXQ6 578 aaPredicted RBP12.44□□□□□ -0.42
TRIM59-207ENST00000496222 CNTNAP3Q9BZ76 1288 aa12.44□□□□□ -0.42
TRIM59-207ENST00000496222 SP110Q9HB58 689 aa12.44□□□□□ -0.42
TRIM59-207ENST00000496222 PCDH12Q9NPG4 1184 aa12.44□□□□□ -0.42
TRIM59-207ENST00000496222 SEPT3Q9UH03 358 aa12.44□□□□□ -0.42
TRIM59-207ENST00000496222 EPG5Q9HCE0 2579 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 FAM221BA6H8Z2 402 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 RIOK3O14730 519 aaKnown RBP12.43□□□□□ -0.42
TRIM59-207ENST00000496222 YKT6O15498 198 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 HTRA2O43464 458 aaPredicted RBP12.43□□□□□ -0.42
TRIM59-207ENST00000496222 MAGEC1O60732 1142 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 MMP20O60882 483 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 KRT7P08729 469 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 ATXN1LP0C7T5 689 aaKnown RBP12.43□□□□□ -0.42
TRIM59-207ENST00000496222 FTH1P19P0C7X4 201 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 KDELR1P24390 212 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 SERPINB6P35237 376 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 GJC1P36383 396 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 MMP12P39900 470 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 GRK6P43250 576 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 HADHBP55084 474 aaKnown RBP12.43□□□□□ -0.42
TRIM59-207ENST00000496222 PFN3P60673 137 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 FOXC1Q12948 553 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 BRAT1Q6PJG6 821 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 Q6ZSR6 202 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 LRRC49Q8IUZ0 686 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 RHOT2Q8IXI1 618 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 SLC25A45Q8N413 288 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 KCTD6Q8NC69 237 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 FAM174AQ8TBP5 190 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 MAML1Q92585 1016 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 CDC6Q99741 560 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 CINPQ9BW66 212 aaPredicted RBP12.43□□□□□ -0.42
TRIM59-207ENST00000496222 PCDHB9Q9Y5E1 797 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 PTPRBP23467 1997 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 KMT2BQ9UMN6 2715 aaPredicted RBP12.43□□□□□ -0.42
TRIM59-207ENST00000496222 PLXNB3Q9ULL4 1909 aa12.43□□□□□ -0.42
TRIM59-207ENST00000496222 TDRD6O60522 2096 aaKnown RBP12.42□□□□□ -0.42
TRIM59-207ENST00000496222 MAP1BP46821 2468 aaKnown RBP12.42□□□□□ -0.42
TRIM59-207ENST00000496222 A6NNZ2 444 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 TMEM110-MUSTN1A8MSY1 372 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 ZNF487B1APH4 448 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 NEMP1O14524 444 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 HYAL3O43820 417 aaPredicted RBP12.42□□□□□ -0.42
TRIM59-207ENST00000496222 PRKCGP05129 697 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 GIMD1P0DJR0 217 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 GM2AP17900 193 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 IGFALSP35858 605 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 GARSP41250 739 aaKnown RBP12.42□□□□□ -0.42
TRIM59-207ENST00000496222 ARRB1P49407 418 aaPredicted RBP12.42□□□□□ -0.42
TRIM59-207ENST00000496222 SCNN1BP51168 640 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 RENBPP51606 427 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 AP1S1P61966 158 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 GBE1Q04446 702 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 RALGDSQ12967 914 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 SGCGQ13326 291 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 FZD2Q14332 565 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 AGERQ15109 404 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 LRRC38Q5VT99 294 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 VSIG1Q86XK7 387 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 CHCHD4Q8N4Q1 142 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 OXR1Q8N573 874 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 ATPAF2Q8N5M1 289 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 PNPLA1Q8N8W4 532 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 TP53I13Q8NBR0 393 aaPredicted RBP12.42□□□□□ -0.42
TRIM59-207ENST00000496222 DENND6BQ8NEG7 585 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 ADAMTS14Q8WXS8 1223 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 FATE1Q969F0 183 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 IFT43Q96FT9 208 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 TSGA13Q96PP4 275 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 RNF157Q96PX1 679 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 PANX2Q96RD6 677 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 NUDCD1Q96RS6 583 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 WRAP53Q9BUR4 548 aaKnown RBP12.42□□□□□ -0.42
TRIM59-207ENST00000496222 SCNM1Q9BWG6 230 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 CALN1Q9BXU9 219 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 ATP13A3Q9H7F0 1226 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 NOD2Q9HC29 1040 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 MBNL1Q9NR56 388 aaKnown RBP12.42□□□□□ -0.42
TRIM59-207ENST00000496222 KLF15Q9UIH9 416 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 PNMA8BQ9ULN7 279 aaPredicted RBP12.42□□□□□ -0.42
TRIM59-207ENST00000496222 TFR2Q9UP52 801 aa12.42□□□□□ -0.42
TRIM59-207ENST00000496222 USP24Q9UPU5 2620 aa12.41□□□□□ -0.42
TRIM59-207ENST00000496222 SPTY2D1-AS1A0A0U1RR47 76 aa12.41□□□□□ -0.42
TRIM59-207ENST00000496222 RCCD1A6NED2 376 aa12.41□□□□□ -0.42
TRIM59-207ENST00000496222 TNFSF14O43557 240 aa12.41□□□□□ -0.42
TRIM59-207ENST00000496222 TRIM16O95361 564 aa12.41□□□□□ -0.42
TRIM59-207ENST00000496222 MAP3K6O95382 1288 aa12.41□□□□□ -0.42
TRIM59-207ENST00000496222 ITGAVP06756 1048 aa12.41□□□□□ -0.42
TRIM59-207ENST00000496222 DGKAP23743 735 aa12.41□□□□□ -0.42
TRIM59-207ENST00000496222 SERPINA4P29622 427 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms