RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 H3BM21 787 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 SDC3O75056 442 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 NME1P15531 152 aaKnown RBP24.46■■□□□ 1.51
HLA-C-209ENST00000495835 SERPINB6P35237 376 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 HNF1BP35680 557 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 POLR2LP62875 67 aaKnown RBP24.46■■□□□ 1.51
HLA-C-209ENST00000495835 DNAJC3Q13217 504 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 HADHQ16836 314 aaKnown RBP24.46■■□□□ 1.51
HLA-C-209ENST00000495835 CFAP58Q5T655 872 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 SPECC1LQ69YQ0 1117 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 ERAP2Q6P179 960 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 TMCO3Q6UWJ1 677 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 LRRC49Q8IUZ0 686 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 NETO2Q8NC67 525 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 BTN2A2Q8WVV5 523 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 USP29Q9HBJ7 922 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.46■■□□□ 1.51
HLA-C-209ENST00000495835 DNAJC28Q9NX36 388 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 NLGN3Q9NZ94 848 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 SEPT3Q9UH03 358 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 NENFQ9UMX5 172 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 KNTC1P50748 2209 aa24.46■■□□□ 1.51
HLA-C-209ENST00000495835 SCAMP1O15126 338 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 SIGLEC6O43699 453 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 BUB1BO60566 1050 aaPredicted RBP24.45■■□□□ 1.5
HLA-C-209ENST00000495835 MMP20O60882 483 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 PIGNO95427 931 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 HSPA9P38646 679 aaKnown RBP24.45■■□□□ 1.5
HLA-C-209ENST00000495835 AP1S1P61966 158 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 SLC25A11Q02978 314 aaKnown RBP24.45■■□□□ 1.5
HLA-C-209ENST00000495835 BCL2L1Q07817 233 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 PDE1CQ14123 709 aaPredicted RBP24.45■■□□□ 1.5
HLA-C-209ENST00000495835 SMTNL2Q2TAL5 461 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 PDCD7Q8N8D1 485 aaKnown RBP24.45■■□□□ 1.5
HLA-C-209ENST00000495835 FAM181AQ8N9Y4 354 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 OR8K1Q8NGG5 319 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 FAM71BQ8TC56 605 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 SPOCK2Q92563 424 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 HSPH1Q92598 858 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 TBATAQ96M53 351 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 CSPG4P5Q96PW8 444 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 DNAJC7Q99615 494 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 CCDC86Q9H6F5 360 aaKnown RBP24.45■■□□□ 1.5
HLA-C-209ENST00000495835 EVA1BQ9NVM1 165 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 UVRAGQ9P2Y5 699 aa24.45■■□□□ 1.5
HLA-C-209ENST00000495835 GOLGA4Q13439 2230 aaKnown RBP24.45■■□□□ 1.5
HLA-C-209ENST00000495835 ANKRD36A6QL64 1941 aa24.44■■□□□ 1.5
HLA-C-209ENST00000495835 A0A1W2PQ67 120 aa24.44■■□□□ 1.5
HLA-C-209ENST00000495835 TRIM38O00635 465 aa24.44■■□□□ 1.5
HLA-C-209ENST00000495835 TCF4P15884 667 aa24.44■■□□□ 1.5
HLA-C-209ENST00000495835 E2F1Q01094 437 aa24.44■■□□□ 1.5
HLA-C-209ENST00000495835 CAMK2BQ13554 666 aa24.44■■□□□ 1.5
HLA-C-209ENST00000495835 LBRQ14739 615 aaKnown RBP24.44■■□□□ 1.5
HLA-C-209ENST00000495835 SLC18A3Q16572 532 aa24.44■■□□□ 1.5
HLA-C-209ENST00000495835 PROSER1Q86XN7 944 aa24.44■■□□□ 1.5
HLA-C-209ENST00000495835 ECHDC3Q96DC8 303 aa24.44■■□□□ 1.5
HLA-C-209ENST00000495835 PCDH18Q9HCL0 1135 aa24.44■■□□□ 1.5
HLA-C-209ENST00000495835 UCKL1Q9NWZ5 548 aa24.44■■□□□ 1.5
HLA-C-209ENST00000495835 CFAP47Q6ZTR5 3102 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.43■■□□□ 1.5
HLA-C-209ENST00000495835 SSU72P8A0A1W2PR75 194 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 SRRM3A6NNA2 597 aaPredicted RBP24.43■■□□□ 1.5
HLA-C-209ENST00000495835 TMEM110-MUSTN1A8MSY1 372 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 H2AFZP0C0S5 128 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 GIMD1P0DJR0 217 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 AMPD1P23109 780 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 RGRP47804 291 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 PEX5P50542 639 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 THOP1P52888 689 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 TSR1Q2NL82 804 aaKnown RBP24.43■■□□□ 1.5
HLA-C-209ENST00000495835 CCDC157Q569K6 752 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 RALGPS1Q5JS13 557 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 H2AFVQ71UI9 128 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 CAMK1DQ8IU85 385 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 BBS5Q8N3I7 341 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 TP53I13Q8NBR0 393 aaPredicted RBP24.43■■□□□ 1.5
HLA-C-209ENST00000495835 ZNF564Q8TBZ8 553 aaPredicted RBP24.43■■□□□ 1.5
HLA-C-209ENST00000495835 RFFLQ8WZ73 363 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 PCDH12Q9NPG4 1184 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 ZNHIT6Q9NWK9 470 aaKnown RBP24.43■■□□□ 1.5
HLA-C-209ENST00000495835 NCKIPSDQ9NZQ3 722 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 ATP8A1Q9Y2Q0 1164 aa24.43■■□□□ 1.5
HLA-C-209ENST00000495835 TPM1P09493 284 aa24.42■■□□□ 1.5
HLA-C-209ENST00000495835 CKMT1AP12532 417 aa24.42■■□□□ 1.5
HLA-C-209ENST00000495835 IGFALSP35858 605 aa24.42■■□□□ 1.5
HLA-C-209ENST00000495835 EIF4A3P38919 411 aaKnown RBP24.42■■□□□ 1.5
HLA-C-209ENST00000495835 DUSP3P51452 185 aaPredicted RBP24.42■■□□□ 1.5
HLA-C-209ENST00000495835 LRRC14Q15048 493 aa24.42■■□□□ 1.5
HLA-C-209ENST00000495835 LRRC73Q5JTD7 316 aa24.42■■□□□ 1.5
HLA-C-209ENST00000495835 ARHGAP36Q6ZRI8 547 aa24.42■■□□□ 1.5
HLA-C-209ENST00000495835 NSMCE1Q8WV22 266 aa24.42■■□□□ 1.5
HLA-C-209ENST00000495835 CTNNBL1Q8WYA6 563 aaPredicted RBP24.42■■□□□ 1.5
HLA-C-209ENST00000495835 BTBD6Q96KE9 485 aa24.42■■□□□ 1.5
HLA-C-209ENST00000495835 WRAP53Q9BUR4 548 aaKnown RBP24.42■■□□□ 1.5
HLA-C-209ENST00000495835 TSPY26PQ9H489 355 aa24.42■■□□□ 1.5
HLA-C-209ENST00000495835 LRRK1Q38SD2 2015 aa24.42■■□□□ 1.5
HLA-C-209ENST00000495835 TRAFD1O14545 582 aaPredicted RBP24.41■■□□□ 1.5
HLA-C-209ENST00000495835 TPP1O14773 563 aa24.41■■□□□ 1.5
HLA-C-209ENST00000495835 MAFKO60675 156 aa24.41■■□□□ 1.5
HLA-C-209ENST00000495835 JUPP14923 745 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms