RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 TIMP2P16035 220 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 CD27P26842 260 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 MAT2AP31153 395 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 TNNT3P45378 269 aaPredicted RBP12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 EPHB1P54762 984 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 TAS2R38P59533 333 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 RPS21P63220 83 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 DSC2Q02487 901 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 CCDC6Q16204 474 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 UGP2Q16851 508 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 DUOXA1Q1HG43 343 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 SETMARQ53H47 684 aaPredicted RBP12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 TEX44Q53QW1 395 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 ARMC12Q5T9G4 340 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 KIAA1161Q6NSJ0 714 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 ADAT2Q7Z6V5 191 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 ZSCAN30Q86W11 494 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 TRIM69Q86WT6 500 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 DCLK2Q8N568 766 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 CXorf40AQ8TE69 158 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 MAIP1Q8WWC4 291 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 FAM118BQ9BPY3 351 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 HERPUD2Q9BSE4 406 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 NUSAP1Q9BXS6 441 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 SEMA4GQ9NTN9 838 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 PCDHB9Q9Y5E1 797 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 RAI2Q9Y5P3 530 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 FADS3Q9Y5Q0 445 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 RALGAPA1Q6GYQ0 2036 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 A0A1B0GTW7 788 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 A0A1W2PPC4 97 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 TSPAN11A1L157 253 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 BCAT2O15382 392 aaPredicted RBP12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 KCNN4O15554 427 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 CEP104O60308 925 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 CPP00450 1065 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 IGHV4-34P06331 123 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 ZNF806P0C7X5 589 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 PTPN3P26045 913 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 RBL1P28749 1068 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 CXCR5P32302 372 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 CD86P42081 329 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 ABL2P42684 1182 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 PPP2CBP62714 309 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 PPP2CAP67775 309 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 FAM193AP78312 1265 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 SGCGQ13326 291 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 KLF1Q13351 362 aaPredicted RBP12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 TEAD4Q15561 434 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 CSRP2Q16527 193 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 TRIM61Q5EBN2 209 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 LRRC73Q5JTD7 316 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 ALG1LQ6GMV1 187 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 PID1Q7Z2X4 250 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 HORMAD1Q86X24 394 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 SLC13A5Q86YT5 568 aaPredicted RBP12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 SLC35F6Q8N357 371 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 ZCCHC9Q8N567 271 aaKnown RBP12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 SKA1Q96BD8 255 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 ECHDC3Q96DC8 303 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 TEKT5Q96M29 485 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 TLR10Q9BXR5 811 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 FRMD8P1Q9BZ68 369 aaPredicted RBP12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 SLC25A51Q9H1U9 297 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 PCDH12Q9NPG4 1184 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 TMEM74BQ9NUR3 256 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 TRHDEQ9UKU6 1024 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 PHTF1Q9UMS5 762 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 DMTF1Q9Y222 760 aa12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 TNRC6BQ9UPQ9 1833 aaKnown RBP12.18□□□□□ -0.46
CSNK1E-213ENST00000495232 LAMA1P25391 3075 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 USP27XA6NNY8 438 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 TRAFD1O14545 582 aaPredicted RBP12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 HTRA2O43464 458 aaPredicted RBP12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 PGLSO95336 258 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 FGGP02679 453 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 AFF3P51826 1226 aaKnown RBP12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 GNG11P61952 73 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 TRAF2Q12933 501 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 STAT4Q14765 748 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 LONRF2Q1L5Z9 754 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 PLA2G2CQ5R387 149 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 PEAR1Q5VY43 1037 aaPredicted RBP12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 ITPRIPL1Q6GPH6 555 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 CCDC70Q6NSX1 233 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 USP45Q70EL2 814 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 CNTD1Q8N815 330 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 ARRDC2Q8TBH0 407 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 KLK6Q92876 244 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 VOPP1Q96AW1 172 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 IFT43Q96FT9 208 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 SERAC1Q96JX3 654 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 PBKQ96KB5 322 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 RBM15Q96T37 977 aaKnown RBP eCLIP12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 WRAP53Q9BUR4 548 aaKnown RBP12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 C1QTNF7Q9BXJ2 289 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 ADGRE3Q9BY15 652 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 SLC17A9Q9BYT1 436 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms