RNA–Protein interactions for RNA: ENST00000495175.6

TRIT1-213, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best)

Gene TRIT1, Length 1,156 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-213ENST00000495175 MCCC1Q96RQ3 725 aaPredicted RBP11.23□□□□□ -0.61
TRIT1-213ENST00000495175 RBM15Q96T37 977 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRIT1-213ENST00000495175 NAP1L3Q99457 506 aaPredicted RBP11.23□□□□□ -0.61
TRIT1-213ENST00000495175 DUSP15Q9H1R2 295 aaPredicted RBP11.23□□□□□ -0.61
TRIT1-213ENST00000495175 HOMER3Q9NSC5 361 aa11.23□□□□□ -0.61
TRIT1-213ENST00000495175 KLHL8Q9P2G9 620 aaPredicted RBP11.23□□□□□ -0.61
TRIT1-213ENST00000495175 RNF14Q9UBS8 474 aa11.23□□□□□ -0.61
TRIT1-213ENST00000495175 GGT7Q9UJ14 662 aa11.23□□□□□ -0.61
TRIT1-213ENST00000495175 FADS3Q9Y5Q0 445 aa11.23□□□□□ -0.61
TRIT1-213ENST00000495175 SCN8AQ9UQD0 1980 aa11.23□□□□□ -0.61
TRIT1-213ENST00000495175 BPTFQ12830 3046 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 LOC285095A0A1B0GVY8 99 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 UPK3BL1B0FP48 263 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 UPK3BL2E5RIL1 263 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 RNASEH2AO75792 299 aaKnown RBP11.22□□□□□ -0.61
TRIT1-213ENST00000495175 RPP40O75818 363 aaKnown RBP11.22□□□□□ -0.61
TRIT1-213ENST00000495175 TUBB4AP04350 444 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 IGHV4-34P06331 123 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 SERPINF2P08697 491 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 ZSCAN5DPP0CG00 497 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 OXTRP30559 389 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 CNR2P34972 360 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 RPL22P35268 128 aaKnown RBP11.22□□□□□ -0.61
TRIT1-213ENST00000495175 MMP12P39900 470 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 FNTAP49354 379 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 NEK3P51956 506 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 PPP2CBP62714 309 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 PPP2CAP67775 309 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 RAD51Q06609 339 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 BCL2L1Q07817 233 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 MSLNQ13421 630 aaPredicted RBP11.22□□□□□ -0.61
TRIT1-213ENST00000495175 PTPRRQ15256 657 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 MYLKQ15746 1914 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 CDKN3Q16667 212 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 UGP2Q16851 508 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 OTOGLQ3ZCN5 2332 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 PLK5Q496M5 336 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 TMEM259Q4ZIN3 620 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 USP39Q53GS9 565 aaKnown RBP11.22□□□□□ -0.61
TRIT1-213ENST00000495175 LRRC73Q5JTD7 316 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 PMS2CLQ68D20 193 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 BRAT1Q6PJG6 821 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.22□□□□□ -0.61
TRIT1-213ENST00000495175 PID1Q7Z2X4 250 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 FAM124AQ86V42 546 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 PGBD3Q8N328 593 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 CBARPQ8N350 705 aaPredicted RBP11.22□□□□□ -0.61
TRIT1-213ENST00000495175 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRIT1-213ENST00000495175 PPP1R16AQ96I34 528 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 DDX47Q9H0S4 455 aaKnown RBP11.22□□□□□ -0.61
TRIT1-213ENST00000495175 EPC1Q9H2F5 836 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 C6orf106Q9H6K1 298 aaPredicted RBP11.22□□□□□ -0.61
TRIT1-213ENST00000495175 EBF2Q9HAK2 575 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 SGK2Q9HBY8 427 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 PCYOX1Q9UHG3 505 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 ZFR2Q9UPR6 939 aaKnown RBP11.22□□□□□ -0.61
TRIT1-213ENST00000495175 ZNF148Q9UQR1 794 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 ITM2BQ9Y287 266 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 TTLL3Q9Y4R7 772 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 R4GN57 208 aa11.22□□□□□ -0.61
TRIT1-213ENST00000495175 THADAQ6YHU6 1953 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 PLXNA2O75051 1894 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 LAMA1P25391 3075 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 ZNF292O60281 2723 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 F5H423 210 aaPredicted RBP11.21□□□□□ -0.61
TRIT1-213ENST00000495175 KIF2AO00139 706 aaPredicted RBP11.21□□□□□ -0.61
TRIT1-213ENST00000495175 HAX1O00165 279 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 RIOK3O14730 519 aaKnown RBP11.21□□□□□ -0.61
TRIT1-213ENST00000495175 LATO43561 262 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 ZNF500O60304 480 aaPredicted RBP11.21□□□□□ -0.61
TRIT1-213ENST00000495175 SEMA4FO95754 770 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 PRKCGP05129 697 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 ACADMP11310 421 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 DEKP35659 375 aaKnown RBP11.21□□□□□ -0.61
TRIT1-213ENST00000495175 NBL1P41271 181 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 PTPN5P54829 565 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 WNT3AP56704 352 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 ITKQ08881 620 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 OLIG2Q13516 323 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 FGL2Q14314 439 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 QPCTQ16769 361 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 PARP6Q2NL67 630 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 TMEM52BQ4KMG9 183 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 DENND5AQ6IQ26 1287 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 CCDC137Q6PK04 289 aaKnown RBP11.21□□□□□ -0.61
TRIT1-213ENST00000495175 SUMF1Q8NBK3 374 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 OR2T34Q8NGX1 318 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 ATL2Q8NHH9 583 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 C1orf216Q8TAB5 229 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 MAGOHBQ96A72 148 aaKnown RBP11.21□□□□□ -0.61
TRIT1-213ENST00000495175 RAB7BQ96AH8 199 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 FEM1CQ96JP0 617 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 LYSMD1Q96S90 227 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 OMDQ99983 421 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 BTBD1Q9H0C5 482 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 KDM4CQ9H3R0 1056 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 PCDH12Q9NPG4 1184 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 VPS45Q9NRW7 570 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 UBP1Q9NZI7 540 aa11.21□□□□□ -0.61
TRIT1-213ENST00000495175 FAM153AQ9UHL3 310 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms