RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 ADGRF4Q8IZF3 695 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 TXLNBQ8N3L3 684 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 C10orf53Q8N6V4 93 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ATP11CQ8NB49 1132 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 DRAXINQ8NBI3 349 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 KCTD6Q8NC69 237 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ZBTB44Q8NCP5 570 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CCDC148Q8NFR7 591 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 FAM71BQ8TC56 605 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 NEK9Q8TD19 979 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 OTUD7AQ8TE49 926 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 GRK7Q8WTQ7 553 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 TBC1D22AQ8WUA7 517 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 DEPDC1BQ8WUY9 529 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 THAP4Q8WY91 577 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 SHC3Q92529 594 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ATP6V0A1Q93050 837 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 PTP4A1Q93096 173 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 SDCCAG3Q96C92 435 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ZNF653Q96CK0 615 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 EID2BQ96D98 161 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CALML4Q96GE6 196 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 WDYHV1Q96HA8 205 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 MED30Q96HR3 178 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 MSLNLQ96KJ4 702 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 PPP1R13BQ96KQ4 1090 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 C1orf74Q96LT6 269 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CCDC114Q96M63 670 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 COG8Q96MW5 612 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 HIST1H2AAQ96QV6 131 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ATP6V0BQ99437 205 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CITED2Q99967 270 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CCDC94Q9BW85 323 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 TM2D2Q9BX73 214 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 EIF2AQ9BY44 585 aaKnown RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 C1orf21Q9H246 121 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 RWDD1Q9H446 243 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 TASP1Q9H6P5 420 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 LIN28AQ9H9Z2 209 aaKnown RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ERVK-5Q9HDB9 667 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 PDE7BQ9NP56 450 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 TM7SF3Q9NS93 570 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 TMEM51Q9NW97 253 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 TBC1D14Q9P2M4 693 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 SUCLA2Q9P2R7 463 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 WNT16Q9UBV4 365 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 FEM1BQ9UK73 627 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 OGDHLQ9ULD0 1010 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 PCDHGB4Q9UN71 923 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 PCDHA7Q9UN72 937 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CAB39Q9Y376 341 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 MRPL11Q9Y3B7 192 aaKnown RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 AP1M2Q9Y6Q5 423 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 GPR75-ASB3A0A0A6YYF3 556 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.32□□□□□ -2.04
PTPN12-212ENST00000494248 CLRN2A0PK11 232 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 AQP7P3A6NL99 342 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 AGAP14A8MT82 685 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 THAP12O43422 761 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 TBX10O75333 385 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 CSPG5O95196 566 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 IPO7O95373 1038 aaKnown RBP2.32□□□□□ -2.04
PTPN12-212ENST00000494248 PNPP00491 289 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 AFPP02771 609 aaKnown RBP2.32□□□□□ -2.04
PTPN12-212ENST00000494248 UMODP07911 640 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 CSF1P09603 554 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 RHOXF2BP0C7M4 288 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 HSPA1AP0DMV8 641 aaKnown RBP2.32□□□□□ -2.04
PTPN12-212ENST00000494248 HSPA1BP0DMV9 641 aaKnown RBP2.32□□□□□ -2.04
PTPN12-212ENST00000494248 SKILP12757 684 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 LAMP2P13473 410 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 HGFP14210 728 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 TPH1P17752 444 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 ARF4P18085 180 aaPredicted RBP2.32□□□□□ -2.04
PTPN12-212ENST00000494248 KCNA5P22460 613 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 PSMA4P25789 261 aaKnown RBP2.32□□□□□ -2.04
PTPN12-212ENST00000494248 KLRC1P26715 233 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 CST5P28325 142 aaPredicted RBP2.32□□□□□ -2.04
PTPN12-212ENST00000494248 MAPK4P31152 587 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 ACSL1P33121 698 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 TCF7P36402 384 aaPredicted RBP2.32□□□□□ -2.04
PTPN12-212ENST00000494248 ARL3P36405 182 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 THPOP40225 353 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 MATR3P43243 847 aaKnown RBP eCLIP2.32□□□□□ -2.04
PTPN12-212ENST00000494248 SULT1E1P49888 294 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 ARFIP1P53367 373 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 GAS1P54826 345 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 P2RX3P56373 397 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 AP2B1P63010 937 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 FMO1Q01740 532 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 CYP4A11Q02928 519 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 MECOMQ03112 1051 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 EGR4Q05215 589 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 AIMP1Q12904 312 aaKnown RBP2.32□□□□□ -2.04
PTPN12-212ENST00000494248 COASYQ13057 564 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 ZBTB17Q13105 803 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 NAA25Q14CX7 972 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 CNGA2Q16280 664 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 KYNUQ16719 465 aa2.32□□□□□ -2.04
PTPN12-212ENST00000494248 KRTAP13-3Q3SY46 172 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms