RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	CFI	P05156	583 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	HLA-DQB2	P05538	268 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	SERPINF2	P08697	491 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	AFF3	P51826	1226 aa	Known RBP	10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	RPS21	P63220	83 aa	Known RBP	10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	OTUD4	Q01804	1114 aa	Known RBP	10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	LMNB2	Q03252	620 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	ZBTB17	Q13105	803 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	UGP2	Q16851	508 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	DUOXA1	Q1HG43	343 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	SLC45A4	Q5BKX6	768 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	TRIM61	Q5EBN2	209 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	PRPF39	Q86UA1	669 aa	Known RBP	10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	HORMAD1	Q86X24	394 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	ZCCHC9	Q8N567	271 aa	Known RBP	10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	ACTL9	Q8TC94	416 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	PDCD6IP	Q8WUM4	868 aa	Known RBP	10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	ECHDC3	Q96DC8	303 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	FEM1C	Q96JP0	617 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	NUSAP1	Q9BXS6	441 aa	Known RBP	10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	NOD2	Q9HC29	1040 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	TMEM74B	Q9NUR3	256 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	DMTF1	Q9Y222	760 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	ATP8A1	Q9Y2Q0	1164 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	JRKL	Q9Y4A0	524 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	FADS3	Q9Y5Q0	445 aa		10.08	□□□□□ -0.8
MACF1-222	ENST00000494012	CACNA1E	Q15878	2313 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012		A0A1W2PQU0	124 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	C10orf142	B7Z368	130 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012		H7C0C1	242 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	TRAFD1	O14545	582 aa	Predicted RBP	10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	AREL1	O15033	823 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	HTRA2	O43464	458 aa	Predicted RBP	10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	GJB3	O75712	270 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	CP	P00450	1065 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	MAOB	P27338	520 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	ABL2	P42684	1182 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	ATP5O	P48047	213 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	GRIA4	P48058	902 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	EIF3E	P60228	445 aa	Known RBP	10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	PPP2CB	P62714	309 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	RACK1	P63244	317 aa	Known RBP	10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	PPP2CA	P67775	309 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	DSC2	Q02487	901 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	KLF1	Q13351	362 aa	Predicted RBP	10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	TEAD4	Q15561	434 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	SLC14A2	Q15849	920 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	CCDC6	Q16204	474 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	TEX44	Q53QW1	395 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	ARMC12	Q5T9G4	340 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	NAPEPLD	Q6IQ20	393 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	AADACL2	Q6P093	401 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	SLC23A3	Q6PIS1	610 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	PRR23C	Q6ZRP0	262 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	REXO1L1P	Q8IX06	675 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	NDUFAF2	Q8N183	169 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	DCLK2	Q8N568	766 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	CXorf40A	Q8TE69	158 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	LRRN4	Q8WUT4	740 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	HTR3C	Q8WXA8	447 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	SKA1	Q96BD8	255 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	AGAP3	Q96P47	875 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	HERPUD2	Q9BSE4	406 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	C1QTNF7	Q9BXJ2	289 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	PARD6A	Q9NPB6	346 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	KLHL8	Q9P2G9	620 aa	Predicted RBP	10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	TRHDE	Q9UKU6	1024 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	SLC6A14	Q9UN76	642 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	PCDHB9	Q9Y5E1	797 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	PCDHGC4	Q9Y5F7	938 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	LRRK1	Q38SD2	2015 aa		10.07	□□□□□ -0.8
MACF1-222	ENST00000494012	PCDH15	Q96QU1	1955 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	GON4L	Q3T8J9	2241 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	TTC24	A2A3L6	582 aa	Predicted RBP	10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	PRAMEF26	H0Y7S4	382 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	RIOK3	O14730	519 aa	Known RBP	10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	PGLS	O95336	258 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	SYP	P08247	313 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	RBP3	P10745	1247 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	TIMP2	P16035	220 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	PTPN3	P26045	913 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	MAT2A	P31153	395 aa	Known RBP	10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	AKT2	P31751	481 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	MMP12	P39900	470 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	EPHB1	P54762	984 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	RPL26	P61254	145 aa	Known RBP	10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	TRAF2	Q12933	501 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	SGCG	Q13326	291 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	ZNF284	Q2VY69	593 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	AASDH	Q4L235	1098 aa	Predicted RBP	10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	TMEM259	Q4ZIN3	620 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	LRRC73	Q5JTD7	316 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	ZNF569	Q5MCW4	686 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	ITPRIPL1	Q6GPH6	555 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	DARS2	Q6PI48	645 aa	Known RBP	10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	USP45	Q70EL2	814 aa		10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	ADAT2	Q7Z6V5	191 aa	Known RBP	10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
MACF1-222	ENST00000494012	CNTD1	Q8N815	330 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms