RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 LEPRP48357 1165 aaKnown RBP11.79□□□□□ -0.52
HDAC4-210ENST00000493582 HK2P52789 917 aa11.79□□□□□ -0.52
HDAC4-210ENST00000493582 POLD3Q15054 466 aaPredicted RBP11.79□□□□□ -0.52
HDAC4-210ENST00000493582 SPANXN3Q5MJ09 141 aa11.79□□□□□ -0.52
HDAC4-210ENST00000493582 OTUD3Q5T2D3 398 aaPredicted RBP11.79□□□□□ -0.52
HDAC4-210ENST00000493582 ARHGEF16Q5VV41 709 aa11.79□□□□□ -0.52
HDAC4-210ENST00000493582 FAM160B2Q86V87 743 aa11.79□□□□□ -0.52
HDAC4-210ENST00000493582 RETREG3Q86VR2 466 aa11.79□□□□□ -0.52
HDAC4-210ENST00000493582 MMAAQ8IVH4 418 aaKnown RBP11.79□□□□□ -0.52
HDAC4-210ENST00000493582 PYROXD2Q8N2H3 581 aa11.79□□□□□ -0.52
HDAC4-210ENST00000493582 PDZD8Q8NEN9 1154 aa11.79□□□□□ -0.52
HDAC4-210ENST00000493582 FAR2Q96K12 515 aa11.79□□□□□ -0.52
HDAC4-210ENST00000493582 NOL6Q9H6R4 1146 aaKnown RBP11.79□□□□□ -0.52
HDAC4-210ENST00000493582 PARVBQ9HBI1 364 aa11.79□□□□□ -0.52
HDAC4-210ENST00000493582 FBRSL1Q9HCM7 1045 aaKnown RBP11.79□□□□□ -0.52
HDAC4-210ENST00000493582 AKIP1Q9NQ31 210 aa11.79□□□□□ -0.52
HDAC4-210ENST00000493582 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.79□□□□□ -0.52
HDAC4-210ENST00000493582 V9GYQ6 96 aa11.79□□□□□ -0.52
HDAC4-210ENST00000493582 TANC1Q9C0D5 1861 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 ZCWPW2A0A1B0GU75 182 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 SDC4P31431 198 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 HNRNPFP52597 415 aaKnown RBP11.78□□□□□ -0.52
HDAC4-210ENST00000493582 ACTR2P61160 394 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 CAPRIN1Q14444 709 aaKnown RBP11.78□□□□□ -0.52
HDAC4-210ENST00000493582 USP10Q14694 798 aaKnown RBP11.78□□□□□ -0.52
HDAC4-210ENST00000493582 TMTC4Q5T4D3 741 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 ATAD3BQ5T9A4 648 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 BROXQ5VW32 411 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 PLEKHG7Q6ZR37 379 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 CYP2U1Q7Z449 544 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 SPRED1Q7Z699 444 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 SLCO6A1Q86UG4 719 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 ITIH5Q86UX2 942 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 IFNEQ86WN2 208 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 CCNYQ8ND76 341 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 CXorf38Q8TB03 319 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 STYXQ8WUJ0 223 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 NRBF2Q96F24 287 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 P2RY11Q96G91 374 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 TSNARE1Q96NA8 513 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 ING2Q9H160 280 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 ZNF229Q9UJW7 825 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 FEM1BQ9UK73 627 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 TCP10L2B9ZVM9 353 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 AP3M2P53677 418 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 GJA9P57773 515 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 TRIM32Q13049 653 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 SLC13A2Q13183 592 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 DGKZQ13574 1117 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 INPP5AQ14642 412 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 MAPRE2Q15555 327 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 CYP51A1Q16850 503 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 ZNF667Q5HYK9 610 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 TSTD2Q5T7W7 516 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 SP8Q8IXZ3 490 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 DNAAF3Q8N9W5 541 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 HTRA1Q92743 480 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 FKBP10Q96AY3 582 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 TMEM176AQ96HP8 235 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 APOL2Q9BQE5 337 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 B3GNT5Q9BYG0 378 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 PORCNQ9H237 461 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 GDAP2Q9NXN4 497 aa11.78□□□□□ -0.52
HDAC4-210ENST00000493582 NOTOA8MTQ0 251 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 INPP4BO15327 924 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 MAN1A2O60476 641 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 PSAPP07602 524 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 GOT1P17174 413 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 HTR1BP28222 390 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 SHMT2P34897 504 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 BMPR1AP36894 532 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 PTGER2P43116 358 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 NAMPTP43490 491 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 LSM3P62310 102 aaKnown RBP11.77□□□□□ -0.52
HDAC4-210ENST00000493582 SQLEQ14534 574 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 FAM209AQ5JX71 171 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 FAM182BQ5T319 152 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 CERCAMQ5T4B2 595 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 NCBP2-AS2Q69YL0 99 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 UGT3A1Q6NUS8 523 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 USP51Q70EK9 711 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 NT5DC4Q86YG4 428 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 ADGRG5Q8IZF4 528 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 CENPLQ8N0S6 344 aaPredicted RBP11.77□□□□□ -0.52
HDAC4-210ENST00000493582 PARP8Q8N3A8 854 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 ZCCHC7Q8N3Z6 543 aaKnown RBP11.77□□□□□ -0.52
HDAC4-210ENST00000493582 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.77□□□□□ -0.52
HDAC4-210ENST00000493582 C12orf29Q8N999 325 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 NXNL1Q96CM4 212 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 PRMT6Q96LA8 375 aaPredicted RBP11.77□□□□□ -0.52
HDAC4-210ENST00000493582 CSPG4P5Q96PW8 444 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 SLC25A23Q9BV35 468 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 OSBPL2Q9H1P3 480 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 CYP4F12Q9HCS2 524 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 LTB4R2Q9NPC1 389 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 PXMP2Q9NR77 195 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 MID2Q9UJV3 735 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 VWA7Q9Y334 891 aa11.77□□□□□ -0.52
HDAC4-210ENST00000493582 KCNK1O00180 336 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 EIF2S1P05198 315 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms