RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 BIN1O00499 593 aa13.38□□□□□ -0.27
USF1-206ENST00000491629 TM7SF2O76062 418 aa13.38□□□□□ -0.27
USF1-206ENST00000491629 GNA14O95837 355 aa13.38□□□□□ -0.27
USF1-206ENST00000491629 F9P00740 461 aa13.38□□□□□ -0.27
USF1-206ENST00000491629 CDH5P33151 784 aaPredicted RBP13.38□□□□□ -0.27
USF1-206ENST00000491629 ARSDP51689 593 aa13.38□□□□□ -0.27
USF1-206ENST00000491629 WSCD2Q2TBF2 565 aa13.38□□□□□ -0.27
USF1-206ENST00000491629 FAM102AQ5T9C2 384 aaPredicted RBP13.38□□□□□ -0.27
USF1-206ENST00000491629 LVRNQ6Q4G3 990 aa13.38□□□□□ -0.27
USF1-206ENST00000491629 TTC7BQ86TV6 843 aa13.38□□□□□ -0.27
USF1-206ENST00000491629 IRF2BP1Q8IU81 584 aa13.38□□□□□ -0.27
USF1-206ENST00000491629 FSTL5Q8N475 847 aaPredicted RBP13.38□□□□□ -0.27
USF1-206ENST00000491629 RYBPQ8N488 228 aaPredicted RBP13.38□□□□□ -0.27
USF1-206ENST00000491629 ARHGAP9Q9BRR9 750 aa13.38□□□□□ -0.27
USF1-206ENST00000491629 WRAP53Q9BUR4 548 aaKnown RBP13.38□□□□□ -0.27
USF1-206ENST00000491629 KLC2Q9H0B6 622 aa13.38□□□□□ -0.27
USF1-206ENST00000491629 NOL6Q9H6R4 1146 aaKnown RBP13.38□□□□□ -0.27
USF1-206ENST00000491629 SYNCQ9H7C4 482 aa13.38□□□□□ -0.27
USF1-206ENST00000491629 GPR34Q9UPC5 381 aa13.38□□□□□ -0.27
USF1-206ENST00000491629 ATP6V1DQ9Y5K8 247 aa13.38□□□□□ -0.27
USF1-206ENST00000491629 CXorf51AA0A1B0GTR3 108 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 BICDL2A1A5D9 508 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 INSIG1O15503 277 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 POP4O95707 220 aaKnown RBP13.37□□□□□ -0.27
USF1-206ENST00000491629 KRT9P35527 623 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 SCNN1AP37088 669 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 PPP1R2P41236 205 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 TLE1Q04724 770 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 PTK2Q05397 1052 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 PAK1Q13153 545 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 ELOCQ15369 112 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 GDPD4Q6W3E5 623 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 ZDHHC17Q8IUH5 632 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 SLITRK4Q8IW52 837 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 ELOA2Q8IYF1 753 aaPredicted RBP13.37□□□□□ -0.27
USF1-206ENST00000491629 Q8N9G6 341 aaPredicted RBP13.37□□□□□ -0.27
USF1-206ENST00000491629 USP7Q93009 1102 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 PDXPQ96GD0 296 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 STRADBQ9C0K7 418 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 DNAI1Q9UI46 699 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 OR1A2Q9Y585 309 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 NOTCH2Q04721 2471 aa13.37□□□□□ -0.27
USF1-206ENST00000491629 TOR1BO14657 336 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 JMJD7P0C870 316 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 PEX5P50542 639 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 SRP54P61011 504 aaKnown RBP13.36□□□□□ -0.27
USF1-206ENST00000491629 SNRPD1P62314 119 aaKnown RBP13.36□□□□□ -0.27
USF1-206ENST00000491629 INPP5AQ14642 412 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 EXOC3L4Q17RC7 722 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 TMEM52BQ4KMG9 183 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 MANEAQ5SRI9 462 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 CERCAMQ5T4B2 595 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 ACBD5Q5T8D3 534 aaPredicted RBP13.36□□□□□ -0.27
USF1-206ENST00000491629 OGFOD3Q6PK18 319 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 ENPP7Q6UWV6 458 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 ZNF574Q6ZN55 896 aaPredicted RBP13.36□□□□□ -0.27
USF1-206ENST00000491629 GBP6Q6ZN66 633 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 RD3Q7Z3Z2 195 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 SPRED1Q7Z699 444 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 CCNJLQ8IV13 435 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 FAM71AQ8IYT1 594 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 EMC1Q8N766 993 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 PLA2G15Q8NCC3 412 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 CXorf40AQ8TE69 158 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 PMEPA1Q969W9 287 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 C18orf8Q96DM3 657 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 ARHGEF26Q96DR7 871 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 FAM81BQ96LP2 452 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 TMEM74Q96NL1 305 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 RBM15Q96T37 977 aaKnown RBP eCLIP13.36□□□□□ -0.27
USF1-206ENST00000491629 APOOQ9BUR5 198 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 SLC12A9Q9BXP2 914 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 GEMIN8Q9NWZ8 242 aaKnown RBP13.36□□□□□ -0.27
USF1-206ENST00000491629 ANKMY1Q9P2S6 941 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 OR12D3Q9UGF7 316 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 DNAJC12Q9UKB3 198 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 APPL1Q9UKG1 709 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 DOLKQ9UPQ8 538 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 RNF215Q9Y6U7 377 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 UNC79Q9P2D8 2635 aa13.36□□□□□ -0.27
USF1-206ENST00000491629 GOLGA8SH3BPF8 625 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 TMX2-CTNND1H3BSU7 103 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 TMCC1O94876 653 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 ALPIP09923 528 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 CTSEP14091 401 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 BLKP51451 505 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 NRG1Q02297 640 aaPredicted RBP13.35□□□□□ -0.27
USF1-206ENST00000491629 NFATC4Q14934 902 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 C16orf72Q14CZ0 275 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 LRRC14Q15048 493 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 C15orf59Q2T9L4 293 aaPredicted RBP13.35□□□□□ -0.27
USF1-206ENST00000491629 OR1E3Q8WZA6 343 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 OSBPL1AQ9BXW6 950 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 TTYH3Q9C0H2 523 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 SLC25A18Q9H1K4 315 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 MAGEH1Q9H213 219 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 SEMA6CQ9H3T2 930 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 TMEM248Q9NWD8 314 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 DKK3Q9UBP4 350 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 PAXBP1Q9Y5B6 917 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms