RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 TP53I13Q8NBR0 393 aaPredicted RBP8.37□□□□□ -1.07
APP-216ENST00000491395 SNIP1Q8TAD8 396 aaKnown RBP8.37□□□□□ -1.07
APP-216ENST00000491395 IFI44Q8TCB0 444 aa8.37□□□□□ -1.07
APP-216ENST00000491395 MAPK15Q8TD08 544 aa8.37□□□□□ -1.07
APP-216ENST00000491395 VCPIP1Q96JH7 1222 aa8.37□□□□□ -1.07
APP-216ENST00000491395 DEPDC7Q96QD5 511 aa8.37□□□□□ -1.07
APP-216ENST00000491395 IL12RB2Q99665 862 aa8.37□□□□□ -1.07
APP-216ENST00000491395 LRRC61Q9BV99 259 aa8.37□□□□□ -1.07
APP-216ENST00000491395 CLPBQ9H078 707 aa8.37□□□□□ -1.07
APP-216ENST00000491395 HAUS4Q9H6D7 363 aa8.37□□□□□ -1.07
APP-216ENST00000491395 PDFQ9HBH1 243 aa8.37□□□□□ -1.07
APP-216ENST00000491395 PCDH12Q9NPG4 1184 aa8.37□□□□□ -1.07
APP-216ENST00000491395 PARVAQ9NVD7 372 aa8.37□□□□□ -1.07
APP-216ENST00000491395 SPASTQ9UBP0 616 aa8.37□□□□□ -1.07
APP-216ENST00000491395 APOBEC3BQ9UH17 382 aaKnown RBP8.37□□□□□ -1.07
APP-216ENST00000491395 SALL4Q9UJQ4 1053 aa8.37□□□□□ -1.07
APP-216ENST00000491395 MYO6Q9UM54 1294 aa8.37□□□□□ -1.07
APP-216ENST00000491395 AP4E1Q9UPM8 1137 aa8.37□□□□□ -1.07
APP-216ENST00000491395 ADAMTS20P59510 1910 aa8.37□□□□□ -1.07
APP-216ENST00000491395 TRPM6Q9BX84 2022 aa8.36□□□□□ -1.07
APP-216ENST00000491395 TSPAN11A1L157 253 aa8.36□□□□□ -1.07
APP-216ENST00000491395 EME2A4GXA9 379 aaPredicted RBP8.36□□□□□ -1.07
APP-216ENST00000491395 LMO7DNF2Z398 122 aa8.36□□□□□ -1.07
APP-216ENST00000491395 EEF2KO00418 725 aaKnown RBP8.36□□□□□ -1.07
APP-216ENST00000491395 DDX3XO00571 662 aaKnown RBP eCLIP8.36□□□□□ -1.07
APP-216ENST00000491395 RIOK3O14730 519 aaKnown RBP8.36□□□□□ -1.07
APP-216ENST00000491395 TPP1O14773 563 aa8.36□□□□□ -1.07
APP-216ENST00000491395 MUSKO15146 869 aa8.36□□□□□ -1.07
APP-216ENST00000491395 CASC3O15234 703 aaKnown RBP8.36□□□□□ -1.07
APP-216ENST00000491395 YY2O15391 372 aa8.36□□□□□ -1.07
APP-216ENST00000491395 RRP8O43159 456 aaKnown RBP8.36□□□□□ -1.07
APP-216ENST00000491395 DAPK3O43293 454 aa8.36□□□□□ -1.07
APP-216ENST00000491395 FTLP02792 175 aaPredicted RBP8.36□□□□□ -1.07
APP-216ENST00000491395 CELA2BP08218 269 aaPredicted RBP8.36□□□□□ -1.07
APP-216ENST00000491395 SKILP12757 684 aa8.36□□□□□ -1.07
APP-216ENST00000491395 C6P13671 934 aa8.36□□□□□ -1.07
APP-216ENST00000491395 TSHRP16473 764 aa8.36□□□□□ -1.07
APP-216ENST00000491395 DESP17661 470 aa8.36□□□□□ -1.07
APP-216ENST00000491395 ERCC2P18074 760 aa8.36□□□□□ -1.07
APP-216ENST00000491395 MIPP30301 263 aa8.36□□□□□ -1.07
APP-216ENST00000491395 HTR7P34969 479 aa8.36□□□□□ -1.07
APP-216ENST00000491395 LIG3P49916 1009 aa8.36□□□□□ -1.07
APP-216ENST00000491395 SUOXP51687 545 aa8.36□□□□□ -1.07
APP-216ENST00000491395 NDST2P52849 883 aa8.36□□□□□ -1.07
APP-216ENST00000491395 GABREP78334 506 aa8.36□□□□□ -1.07
APP-216ENST00000491395 PPARDQ03181 441 aa8.36□□□□□ -1.07
APP-216ENST00000491395 ELP6Q0PNE2 266 aa8.36□□□□□ -1.07
APP-216ENST00000491395 LRRC14Q15048 493 aa8.36□□□□□ -1.07
APP-216ENST00000491395 IRF4Q15306 451 aa8.36□□□□□ -1.07
APP-216ENST00000491395 NR0B2Q15466 257 aa8.36□□□□□ -1.07
APP-216ENST00000491395 TCEA2Q15560 299 aa8.36□□□□□ -1.07
APP-216ENST00000491395 PERM1Q5SV97 790 aa8.36□□□□□ -1.07
APP-216ENST00000491395 AFMIDQ63HM1 303 aa8.36□□□□□ -1.07
APP-216ENST00000491395 MACC1Q6ZN28 852 aa8.36□□□□□ -1.07
APP-216ENST00000491395 RFX8Q6ZV50 586 aa8.36□□□□□ -1.07
APP-216ENST00000491395 CYP4V2Q6ZWL3 525 aaPredicted RBP8.36□□□□□ -1.07
APP-216ENST00000491395 RD3Q7Z3Z2 195 aa8.36□□□□□ -1.07
APP-216ENST00000491395 SRLQ86TD4 932 aa8.36□□□□□ -1.07
APP-216ENST00000491395 HID1Q8IV36 788 aa8.36□□□□□ -1.07
APP-216ENST00000491395 ARHGAP12Q8IWW6 846 aa8.36□□□□□ -1.07
APP-216ENST00000491395 TP53INP2Q8IXH6 220 aa8.36□□□□□ -1.07
APP-216ENST00000491395 SLC35F3Q8IY50 421 aa8.36□□□□□ -1.07
APP-216ENST00000491395 TSEN2Q8NCE0 465 aaKnown RBP8.36□□□□□ -1.07
APP-216ENST00000491395 HCAR2Q8TDS4 363 aa8.36□□□□□ -1.07
APP-216ENST00000491395 BTN2A2Q8WVV5 523 aa8.36□□□□□ -1.07
APP-216ENST00000491395 TSACCQ96A04 125 aaPredicted RBP8.36□□□□□ -1.07
APP-216ENST00000491395 NSMCE3Q96MG7 304 aa8.36□□□□□ -1.07
APP-216ENST00000491395 ZNF641Q96N77 438 aaPredicted RBP8.36□□□□□ -1.07
APP-216ENST00000491395 NAP1L5Q96NT1 182 aaPredicted RBP8.36□□□□□ -1.07
APP-216ENST00000491395 SNRNP25Q9BV90 132 aaKnown RBP8.36□□□□□ -1.07
APP-216ENST00000491395 BOCQ9BWV1 1114 aa8.36□□□□□ -1.07
APP-216ENST00000491395 C1QTNF7Q9BXJ2 289 aa8.36□□□□□ -1.07
APP-216ENST00000491395 SLC13A1Q9BZW2 595 aa8.36□□□□□ -1.07
APP-216ENST00000491395 NAT10Q9H0A0 1025 aaKnown RBP8.36□□□□□ -1.07
APP-216ENST00000491395 PRORYQ9H606 182 aa8.36□□□□□ -1.07
APP-216ENST00000491395 EVA1BQ9NVM1 165 aa8.36□□□□□ -1.07
APP-216ENST00000491395 NCKIPSDQ9NZQ3 722 aa8.36□□□□□ -1.07
APP-216ENST00000491395 CNOT8Q9UFF9 292 aaKnown RBP8.36□□□□□ -1.07
APP-216ENST00000491395 PTPRQQ9UMZ3 2332 aa8.36□□□□□ -1.07
APP-216ENST00000491395 NYNRINQ9P2P1 1898 aaKnown RBP8.35□□□□□ -1.07
APP-216ENST00000491395 A0A1W2PNU3 283 aaPredicted RBP8.35□□□□□ -1.07
APP-216ENST00000491395 TTC24A2A3L6 582 aaPredicted RBP8.35□□□□□ -1.07
APP-216ENST00000491395 ARHGAP42A6NI28 874 aa8.35□□□□□ -1.07
APP-216ENST00000491395 SMTNL1A8MU46 457 aa8.35□□□□□ -1.07
APP-216ENST00000491395 DFFAO00273 331 aa8.35□□□□□ -1.07
APP-216ENST00000491395 TOR1BO14657 336 aa8.35□□□□□ -1.07
APP-216ENST00000491395 PRPSAP2O60256 369 aa8.35□□□□□ -1.07
APP-216ENST00000491395 LZTS3O60299 673 aaPredicted RBP8.35□□□□□ -1.07
APP-216ENST00000491395 PALMO75781 387 aa8.35□□□□□ -1.07
APP-216ENST00000491395 ANXA6P08133 673 aa8.35□□□□□ -1.07
APP-216ENST00000491395 GZMAP12544 262 aa8.35□□□□□ -1.07
APP-216ENST00000491395 MMP12P39900 470 aa8.35□□□□□ -1.07
APP-216ENST00000491395 LSSP48449 732 aa8.35□□□□□ -1.07
APP-216ENST00000491395 CSNK1DP48730 415 aa8.35□□□□□ -1.07
APP-216ENST00000491395 RPIAP49247 311 aa8.35□□□□□ -1.07
APP-216ENST00000491395 PEX5P50542 639 aa8.35□□□□□ -1.07
APP-216ENST00000491395 TLE3Q04726 772 aa8.35□□□□□ -1.07
APP-216ENST00000491395 INPP5AQ14642 412 aa8.35□□□□□ -1.07
APP-216ENST00000491395 ISXQ2M1V0 245 aa8.35□□□□□ -1.07
APP-216ENST00000491395 ALG11Q2TAA5 492 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms