RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 SPIDRQ14159 915 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 C15orf59Q2T9L4 293 aaPredicted RBP8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 TMEM52BQ4KMG9 183 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 NAA35Q5VZE5 725 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 ESRP1Q6NXG1 681 aaKnown RBP8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 GDPD4Q6W3E5 623 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 CCDC81Q6ZN84 652 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 STRADAQ7RTN6 431 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 ZNF677Q86XU0 584 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 ARL10Q8N8L6 244 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 OR6C4Q8NGE1 309 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 SLC30A5Q8TAD4 765 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 NTAN1Q96AB6 310 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 GDAP1L1Q96MZ0 367 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 KLHL32Q96NJ5 620 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 CCNL2Q96S94 520 aaPredicted RBP8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 CCDC3Q9BQI4 270 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 STK33Q9BYT3 514 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 TM6SF2Q9BZW4 377 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 TTYH3Q9C0H2 523 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 B3GNT4Q9C0J1 378 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 PDCL3Q9H2J4 239 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 CLMPQ9H6B4 373 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 HPCAL4Q9UM19 191 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 ITM2BQ9Y287 266 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 FLNCQ14315 2725 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 SCN8AQ9UQD0 1980 aa8.55□□□□□ -1.04
APOBEC3F-204ENST00000491387 LRRK2Q5S007 2527 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 ARHGEF17Q96PE2 2063 aaPredicted RBP8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 CFAP69A5D8W1 941 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 C2CD4BA6NLJ0 364 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 D6RAR5 112 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 FAM72CH0Y354 149 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 KRIT1O00522 736 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 NVLO15381 856 aaKnown RBP8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 TEX33O43247 280 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 NOBOXO60393 691 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 MMP20O60882 483 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 RAMP2O60895 175 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 ITGB2P05107 769 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 PLEKP08567 350 aaPredicted RBP8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 PNLIPP16233 465 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 UGT1A5P35504 534 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 YBEYP58557 167 aaPredicted RBP8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 RAD51Q06609 339 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 ELP6Q0PNE2 266 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 PTP4A2Q12974 167 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 C1orf61Q13536 156 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 ELOCQ15369 112 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 SYCP1Q15431 976 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 CDO1Q16878 200 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 CCDC14Q49A88 953 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 FAXCQ5TGI0 409 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 FAM72AQ5TYM5 149 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 FAM72DQ6L9T8 149 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 OGFOD3Q6PK18 319 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 TTC7BQ86TV6 843 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 VPS36Q86VN1 386 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 FAM72BQ86X60 149 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 FAM114A1Q8IWE2 563 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 AOPEPQ8N6M6 819 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 OR6K2Q8NGY2 324 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 ENOX1Q8TC92 643 aaKnown RBP8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 CXorf40AQ8TE69 158 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 SCG3Q8WXD2 468 aaKnown RBP8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 TMEM159Q96B96 161 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 TBC1D31Q96DN5 1066 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 EPAS1Q99814 870 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 SEMA3CQ99985 751 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 C11orf70Q9BRQ4 267 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 EDEM3Q9BZQ6 932 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 NOL6Q9H6R4 1146 aaKnown RBP8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 MBNL1Q9NR56 388 aaKnown RBP8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 APPL1Q9UKG1 709 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 DGKBQ9Y6T7 804 aa8.54□□□□□ -1.04
APOBEC3F-204ENST00000491387 BOD1L1Q8NFC6 3051 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 NBASA2RRP1 2371 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 A0A1W2PQM1 296 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 WASH4PA8MWX3 477 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 CASC3O15234 703 aaKnown RBP8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 TMCC1O94876 653 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 RASGRP1O95267 797 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 WISP1O95388 367 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 IGSF6O95976 241 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 HOXC4P09017 264 aaPredicted RBP8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 EEF1GP26641 437 aaKnown RBP8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 SDC4P31431 198 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 SLC5A2P31639 672 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 HDAC4P56524 1084 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 ATP11AP98196 1134 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 KCNC4Q03721 635 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 ZFP36L1Q07352 338 aaKnown RBP8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 GRM3Q14832 879 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 NFATC4Q14934 902 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 LRRC14Q15048 493 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 IRF4Q15306 451 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 ALG11Q2TAA5 492 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 KLHL40Q2TBA0 621 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 WSCD2Q2TBF2 565 aa8.53□□□□□ -1.04
APOBEC3F-204ENST00000491387 LINC00303Q3SY05 128 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms