RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 FEM1CQ96JP0 617 aa13.67□□□□□ -0.22
DNMT3A-214ENST00000491288 HSPA12BQ96MM6 686 aa13.67□□□□□ -0.22
DNMT3A-214ENST00000491288 NUDCD1Q96RS6 583 aa13.67□□□□□ -0.22
DNMT3A-214ENST00000491288 LGMNQ99538 433 aa13.67□□□□□ -0.22
DNMT3A-214ENST00000491288 SEPT10Q9P0V9 454 aa13.67□□□□□ -0.22
DNMT3A-214ENST00000491288 SUSD2Q9UGT4 822 aa13.67□□□□□ -0.22
DNMT3A-214ENST00000491288 TTLL3Q9Y4R7 772 aa13.67□□□□□ -0.22
DNMT3A-214ENST00000491288 SHROOM3Q8TF72 1996 aa13.67□□□□□ -0.22
DNMT3A-214ENST00000491288 CEP192Q8TEP8 1941 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 A0A1W2PQ67 120 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 HACD1B0YJ81 288 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 H7C0C1 242 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 APOC4-APOC2K7ER74 178 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 INSIG1O15503 277 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 MTSS1O43312 755 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 PLRG1O43660 514 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 GJB3O75712 270 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 JCHAINP01591 159 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 APOC2P02655 101 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 NFKBIAP25963 317 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 ATP5OP48047 213 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 SUOXP51687 545 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 FOXC1Q12948 553 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 ZNF211Q13398 564 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 MEI1Q5TIA1 1274 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 NEK5Q6P3R8 708 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 NCEH1Q6PIU2 408 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 TEX26Q8N6G2 289 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 MAML1Q92585 1016 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 ALG3Q92685 438 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 HAUS1Q96CS2 278 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 SCNM1Q9BWG6 230 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 POLR1EQ9GZS1 481 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 MIR1-1HGQ9H1L0 117 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 C6orf106Q9H6K1 298 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 DNAAF2Q9NVR5 837 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 TRMT1Q9NXH9 659 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 SAE1Q9UBE0 346 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 DKK3Q9UBP4 350 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 SERGEFQ9UGK8 458 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 PLXND1Q9Y4D7 1925 aa13.66□□□□□ -0.22
DNMT3A-214ENST00000491288 CACNA1EQ15878 2313 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 TMEM8BA6NDV4 472 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 DDX3YO15523 660 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 TSPAN6O43657 245 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 KIF5CO60282 957 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 ZNF189O75820 626 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 PEX11BO96011 259 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 ADRB3P13945 408 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 SPINK2P20155 84 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 CA4P22748 312 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 NUDT1P36639 197 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 CCR5P51681 352 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 METAP1P53582 386 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 ADPRHP54922 357 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 XRCC4Q13426 336 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 UAP1L1Q3KQV9 507 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 BRAT1Q6PJG6 821 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 ZC3H18Q86VM9 953 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 CAMK1DQ8IU85 385 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 NDUFAF2Q8N183 169 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 LRRN4Q8WUT4 740 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 SEMA3CQ99985 751 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 KCNF1Q9H3M0 494 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 SLC32A1Q9H598 525 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 PREBQ9HCU5 417 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 EIF2B4Q9UI10 523 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 ZMIZ1Q9ULJ6 1067 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 NEUROG3Q9Y4Z2 214 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 GON4LQ3T8J9 2241 aa13.65□□□□□ -0.22
DNMT3A-214ENST00000491288 ATXN2Q99700 1313 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 TNRC6BQ9UPQ9 1833 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 ASCC3Q8N3C0 2202 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 KCNK1O00180 336 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 ARHGAP33O14559 1287 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 KCNK3O14649 394 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 RNGTTO60942 597 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 STK10O94804 968 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 PIGNO95427 931 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 CD59P13987 128 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 PECAM1P16284 738 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 MAOBP27338 520 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 RGRP47804 291 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 EIF3EP60228 445 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 MAXP61244 160 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 IFI35P80217 286 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 ADCY2Q08462 1091 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 ELP6Q0PNE2 266 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 SGCGQ13326 291 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 SLC14A1Q13336 389 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 ZNF569Q5MCW4 686 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 PIP5KL1Q5T9C9 394 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 AGBL4Q5VU57 503 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 ERAP2Q6P179 960 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 DARS2Q6PI48 645 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 PARS2Q7L3T8 475 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 ZSCAN30Q86W11 494 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 REXO1L1PQ8IX06 675 aa13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.64□□□□□ -0.23
DNMT3A-214ENST00000491288 PDCD6IPQ8WUM4 868 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms