RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 NFKB2Q00653 900 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 DSG1Q02413 1049 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 PPARDQ03181 441 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 KDSRQ06136 332 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 CACNB2Q08289 660 aaPredicted RBP6.39□□□□□ -1.39
FN1-223ENST00000490833 ITKQ08881 620 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 TRAP1Q12931 704 aaKnown RBP6.39□□□□□ -1.39
FN1-223ENST00000490833 PLD1Q13393 1074 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 ZNF235Q14590 738 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 ADRM1Q16186 407 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 PABPC1LQ4VXU2 614 aaKnown RBP6.39□□□□□ -1.39
FN1-223ENST00000490833 SLC39A12Q504Y0 691 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 RAB6CQ53S08 254 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 CERCAMQ5T4B2 595 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 TSTD2Q5T7W7 516 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 FAM72AQ5TYM5 149 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 KIAA0319Q5VV43 1072 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 IRAK1BP1Q5VVH5 260 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 LYPLAL1Q5VWZ2 237 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 TPGS2Q68CL5 300 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 ALG1LQ6GMV1 187 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 FAM72DQ6L9T8 149 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 TLDC1Q6P9B6 456 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 CERS6Q6ZMG9 384 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 PRR23BQ6ZRT6 265 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 HFE2Q6ZVN8 426 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 CHST9Q7L1S5 443 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 BHLHA9Q7RTU4 235 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 TMC7Q7Z402 723 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 FAM72BQ86X60 149 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 HERC6Q8IVU3 1022 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 SCN4BQ8IWT1 228 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 NPAS3Q8IXF0 933 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 COLGALT2Q8IYK4 626 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 NKAPQ8N5F7 415 aaKnown RBP6.39□□□□□ -1.39
FN1-223ENST00000490833 SLC43A3Q8NBI5 491 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 RNF169Q8NCN4 708 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 IPMKQ8NFU5 416 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 ZSCAN18Q8TBC5 510 aaPredicted RBP6.39□□□□□ -1.39
FN1-223ENST00000490833 FBXO32Q969P5 355 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 PPP2R3CQ969Q6 453 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 MFSD3Q96ES6 412 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 FAM161BQ96MY7 647 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 FCRL3Q96P31 734 aaPredicted RBP6.39□□□□□ -1.39
FN1-223ENST00000490833 BTBD9Q96Q07 612 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 ZNF184Q99676 751 aaPredicted RBP6.39□□□□□ -1.39
FN1-223ENST00000490833 THTPAQ9BU02 230 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 MLPHQ9BV36 600 aaPredicted RBP6.39□□□□□ -1.39
FN1-223ENST00000490833 SLC39A8Q9C0K1 460 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 RAB6CQ9H0N0 254 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 MUC13Q9H3R2 512 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 AGO3Q9H9G7 860 aaKnown RBP6.39□□□□□ -1.39
FN1-223ENST00000490833 ATP13A1Q9HD20 1204 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 ALG13Q9NP73 1137 aaKnown RBP6.39□□□□□ -1.39
FN1-223ENST00000490833 TREX1Q9NSU2 369 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 EVA1BQ9NVM1 165 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 MIOSQ9NXC5 875 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.39□□□□□ -1.394e-34■□□□□ 10.5
FN1-223ENST00000490833 TMEM216Q9P0N5 145 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 MARCH2Q9P0N8 246 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 AP3M1Q9Y2T2 418 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 BACE2Q9Y5Z0 518 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 HS3ST4Q9Y661 456 aa6.39□□□□□ -1.39
FN1-223ENST00000490833 SCN10AQ9Y5Y9 1956 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 A0A1W2PQ67 120 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 ILVBLA1L0T0 632 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 MROH6A6NGR9 719 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 TMEM88BA6NKF7 163 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 G3V2L1 256 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 H3BM21 787 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 H3BMM5 538 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 IFRD1O00458 451 aaPredicted RBP6.38□□□□□ -1.39
FN1-223ENST00000490833 EFCAB14O75071 495 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 SOAT2O75908 522 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 MAP3K6O95382 1288 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 MLYCDO95822 493 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 IGLV3-27P01718 113 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 FGF4P08620 206 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 CTSHP09668 335 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 KITP10721 976 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 COX4I1P13073 169 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 CPB1P15086 417 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 FGFR3P22607 806 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 GLDCP23378 1020 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 PSMA3P25788 255 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 VARSP26640 1264 aaKnown RBP6.38□□□□□ -1.39
FN1-223ENST00000490833 OR1E1P30953 314 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 ARCN1P48444 511 aaKnown RBP6.38□□□□□ -1.39
FN1-223ENST00000490833 ALDH7A1P49419 539 aaKnown RBP6.38□□□□□ -1.39
FN1-223ENST00000490833 TTPAP49638 278 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 CLCN4P51793 760 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 NRLP54845 237 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 ADARP55265 1226 aaKnown RBP6.38□□□□□ -1.39
FN1-223ENST00000490833 STX1BP61266 288 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 ACVR1Q04771 509 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 BTKQ06187 659 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 ZBTB17Q13105 803 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 BLMHQ13867 455 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 SQLEQ14534 574 aa6.38□□□□□ -1.39
FN1-223ENST00000490833 NAA25Q14CX7 972 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms