RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 MYLK3Q32MK0 819 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 PARP15Q460N3 678 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 SEL1L3Q68CR1 1132 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 PARS2Q7L3T8 475 aaKnown RBP10.5□□□□□ -0.73
TTC28-207ENST00000490475 ZNF354CQ86Y25 554 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 SDR16C5Q8N3Y7 309 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 KLK6Q92876 244 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 BTBD6Q96KE9 485 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 CCDC42Q96M95 316 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 ZNF578Q96N58 590 aaPredicted RBP10.5□□□□□ -0.73
TTC28-207ENST00000490475 DCBLD2Q96PD2 775 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 IL12RB2Q99665 862 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 MYOCQ99972 504 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 TM6SF2Q9BZW4 377 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 DEF6Q9H4E7 631 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 MRPL47Q9HD33 250 aaKnown RBP10.5□□□□□ -0.73
TTC28-207ENST00000490475 SPTLC3Q9NUV7 552 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 SPASTQ9UBP0 616 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 DKK3Q9UBP4 350 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 DNAI1Q9UI46 699 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 SALL4Q9UJQ4 1053 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 FZD10Q9ULW2 581 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 ZKSCAN5Q9Y2L8 839 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 FCF1Q9Y324 198 aaKnown RBP10.5□□□□□ -0.73
TTC28-207ENST00000490475 MFHAS1Q9Y4C4 1052 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 SCINQ9Y6U3 715 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 PTPRQQ9UMZ3 2332 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 SHROOM3Q8TF72 1996 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 CAPN8A6NHC0 703 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 K7ESM1 405 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 FFAR2O15552 330 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 AQP9O43315 295 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 BUB1O43683 1085 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 LZTS3O60299 673 aaPredicted RBP10.49□□□□□ -0.73
TTC28-207ENST00000490475 OPA1O60313 960 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 TM7SF2O76062 418 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 DXOO77932 396 aaKnown RBP10.49□□□□□ -0.73
TTC28-207ENST00000490475 XPAP23025 273 aaPredicted RBP10.49□□□□□ -0.73
TTC28-207ENST00000490475 EPHB2P29323 1055 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 MLLT3P42568 568 aaPredicted RBP10.49□□□□□ -0.73
TTC28-207ENST00000490475 ZNF135P52742 658 aaPredicted RBP10.49□□□□□ -0.73
TTC28-207ENST00000490475 CLDN2P57739 230 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 ERVPABLB-1P60509 514 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 PDE1CQ14123 709 aaPredicted RBP10.49□□□□□ -0.73
TTC28-207ENST00000490475 TBC1D25Q3MII6 688 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 BROXQ5VW32 411 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 GDPD4Q6W3E5 623 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 TTC7BQ86TV6 843 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 RTL3Q8N8U3 475 aaKnown RBP10.49□□□□□ -0.73
TTC28-207ENST00000490475 ZNF248Q8NDW4 579 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 ATL2Q8NHH9 583 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 CXorf40AQ8TE69 158 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 SCG3Q8WXD2 468 aaKnown RBP10.49□□□□□ -0.73
TTC28-207ENST00000490475 NAT6Q93015 286 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 BMFQ96LC9 184 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 APOLD1Q96LR9 279 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 NCAPGQ9BPX3 1015 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 NUP85Q9BW27 656 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 CPEB1Q9BZB8 566 aaKnown RBP10.49□□□□□ -0.73
TTC28-207ENST00000490475 SLC13A1Q9BZW2 595 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 FZD3Q9NPG1 666 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 GPATCH2LQ9NWQ4 482 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 CA5BQ9Y2D0 317 aa10.49□□□□□ -0.73
TTC28-207ENST00000490475 LAMA5O15230 3695 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 TEX51A0A1B0GUA7 166 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 POM121BA6NF01 834 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 IGLON5A6NGN9 336 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 WASH4PA8MWX3 477 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 AREL1O15033 823 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 TCEA3O75764 348 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 RNF8O76064 485 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 CD160O95971 181 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 UGT2B4P06133 528 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 H2AFZP0C0S5 128 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 TCF4P15884 667 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 JUNDP17535 347 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 HTR1BP28222 390 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 MIPP30301 263 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 ACVRL1P37023 503 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 LSSP48449 732 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 PEX5P50542 639 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 PCBP4P57723 403 aaKnown RBP10.48□□□□□ -0.73
TTC28-207ENST00000490475 PFN3P60673 137 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 RHOAP61586 193 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 FZD2Q14332 565 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 CA9Q16790 459 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 SOWAHCQ53LP3 525 aaPredicted RBP10.48□□□□□ -0.73
TTC28-207ENST00000490475 CFAP58Q5T655 872 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 ERMARDQ5T6L9 678 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 CDCP2Q5VXM1 449 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 IGF2-ASQ6U949 168 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 KDM7AQ6ZMT4 941 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 H2AFVQ71UI9 128 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 MARCH9Q86YJ5 346 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 SLC22A18ASQ8N1D0 253 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 UMODL1-AS1Q8N2C9 162 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 ZNF548Q8NEK5 533 aaPredicted RBP10.48□□□□□ -0.73
TTC28-207ENST00000490475 MAPK15Q8TD08 544 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 FNIP1Q8TF40 1166 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 CCDC97Q96F63 343 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms