RNA–Protein interactions for RNA: ENST00000490458.1

SNAP29-203, Transcript of synaptosome associated protein 29, humanhuman

TSL 2

Gene SNAP29, Length 972 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-203ENST00000490458 GPT2Q8TD30 523 aa16.52■□□□□ 0.24
SNAP29-203ENST00000490458 TSACCQ96A04 125 aaPredicted RBP16.52■□□□□ 0.24
SNAP29-203ENST00000490458 RAB6CQ9H0N0 254 aa16.52■□□□□ 0.24
SNAP29-203ENST00000490458 NUP62CLQ9H1M0 184 aa16.52■□□□□ 0.24
SNAP29-203ENST00000490458 PDCL3Q9H2J4 239 aa16.52■□□□□ 0.24
SNAP29-203ENST00000490458 LRRN3Q9H3W5 708 aa16.52■□□□□ 0.24
SNAP29-203ENST00000490458 DNAI1Q9UI46 699 aa16.52■□□□□ 0.24
SNAP29-203ENST00000490458 TMEM59LQ9UK28 342 aa16.52■□□□□ 0.24
SNAP29-203ENST00000490458 GPR34Q9UPC5 381 aa16.52■□□□□ 0.24
SNAP29-203ENST00000490458 LOXL2Q9Y4K0 774 aa16.52■□□□□ 0.24
SNAP29-203ENST00000490458 AGRPO00253 132 aa16.51■□□□□ 0.23
SNAP29-203ENST00000490458 NVLO15381 856 aaKnown RBP16.51■□□□□ 0.23
SNAP29-203ENST00000490458 RASGRP1O95267 797 aa16.51■□□□□ 0.23
SNAP29-203ENST00000490458 MAPKAPK2P49137 400 aa16.51■□□□□ 0.23
SNAP29-203ENST00000490458 SRSF1Q07955 248 aaKnown RBP eCLIP16.51■□□□□ 0.23
SNAP29-203ENST00000490458 SMYD5Q6GMV2 418 aa16.51■□□□□ 0.23
SNAP29-203ENST00000490458 RWDD4Q6NW29 188 aaKnown RBP16.51■□□□□ 0.23
SNAP29-203ENST00000490458 RD3Q7Z3Z2 195 aa16.51■□□□□ 0.23
SNAP29-203ENST00000490458 VASH2Q86V25 355 aa16.51■□□□□ 0.23
SNAP29-203ENST00000490458 FAM71AQ8IYT1 594 aa16.51■□□□□ 0.23
SNAP29-203ENST00000490458 SCG3Q8WXD2 468 aaKnown RBP16.51■□□□□ 0.23
SNAP29-203ENST00000490458 NEU3Q9UQ49 428 aa16.51■□□□□ 0.23
SNAP29-203ENST00000490458 COQ6Q9Y2Z9 468 aa16.51■□□□□ 0.23
SNAP29-203ENST00000490458 PCDHGA4Q9Y5G9 962 aa16.51■□□□□ 0.23
SNAP29-203ENST00000490458 HECTD1Q9ULT8 2610 aa16.51■□□□□ 0.23
SNAP29-203ENST00000490458 SPTA1P02549 2419 aa16.51■□□□□ 0.23
SNAP29-203ENST00000490458 ARHGEF17Q96PE2 2063 aaPredicted RBP16.5■□□□□ 0.23
SNAP29-203ENST00000490458 PRAMEF33A0A0G2JMD5 474 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 SUV39H1O43463 412 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 PRAMEF10O60809 474 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 TMCC1O94876 653 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 TIMP2P16035 220 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 RHOQP17081 205 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 WT1P19544 449 aaPredicted RBP16.5■□□□□ 0.23
SNAP29-203ENST00000490458 ETV5P41161 510 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 PEX5P50542 639 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 ATP11AP98196 1134 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 NRG1Q02297 640 aaPredicted RBP16.5■□□□□ 0.23
SNAP29-203ENST00000490458 NFATC4Q14934 902 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 WSCD2Q2TBF2 565 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 MANEAQ5SRI9 462 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 ENPP7Q6UWV6 458 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 GKN2Q86XP6 184 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 CCNJLQ8IV13 435 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 EMC1Q8N766 993 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 NETO2Q8NC67 525 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 GDAP1L1Q96MZ0 367 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 MAGEH1Q9H213 219 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 METTL5Q9NRN9 209 aaKnown RBP16.5■□□□□ 0.23
SNAP29-203ENST00000490458 TMEM248Q9NWD8 314 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 FOXJ2Q9P0K8 574 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 KIAA1468Q9P260 1216 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 HPCAL4Q9UM19 191 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 DOPEY2Q9Y3R5 2298 aa16.5■□□□□ 0.23
SNAP29-203ENST00000490458 FAM72CH0Y354 149 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 RAMP2O60895 175 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 CYP11B1P15538 503 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 BPIFB4P59827 614 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 SRP54P61011 504 aaKnown RBP16.49■□□□□ 0.23
SNAP29-203ENST00000490458 ZFP36L1Q07352 338 aaKnown RBP16.49■□□□□ 0.23
SNAP29-203ENST00000490458 LRRC14Q15048 493 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 TBR1Q16650 682 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 CDO1Q16878 200 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 TMEM52BQ4KMG9 183 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 SDK2Q58EX2 2172 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 COLEC12Q5KU26 742 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 FAM72AQ5TYM5 149 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 TAF3Q5VWG9 929 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 KCTD16Q68DU8 428 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 FAM72DQ6L9T8 149 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 FAM72BQ86X60 149 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 ZFAND4Q86XD8 727 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 IRF2BP1Q8IU81 584 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 GPR156Q8NFN8 814 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 HTR3CQ8WXA8 447 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 PDXPQ96GD0 296 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 MAGEB5Q9BZ81 275 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 TTYH3Q9C0H2 523 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 SEPT10Q9P0V9 454 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 DKK3Q9UBP4 350 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 KLQ9UEF7 1012 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 OR12D3Q9UGF7 316 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 RWDD2AQ9UIY3 292 aa16.49■□□□□ 0.23
SNAP29-203ENST00000490458 TMEM110-MUSTN1A8MSY1 372 aa16.48■□□□□ 0.23
SNAP29-203ENST00000490458 BUB1O43683 1085 aa16.48■□□□□ 0.23
SNAP29-203ENST00000490458 KDELR3O43731 214 aa16.48■□□□□ 0.23
SNAP29-203ENST00000490458 LRIG2O94898 1065 aa16.48■□□□□ 0.23
SNAP29-203ENST00000490458 IGSF6O95976 241 aa16.48■□□□□ 0.23
SNAP29-203ENST00000490458 SFTPCP11686 197 aa16.48■□□□□ 0.23
SNAP29-203ENST00000490458 HTR1BP28222 390 aa16.48■□□□□ 0.23
SNAP29-203ENST00000490458 ADRA1BP35368 520 aa16.48■□□□□ 0.23
SNAP29-203ENST00000490458 CYP4F2P78329 520 aa16.48■□□□□ 0.23
SNAP29-203ENST00000490458 RAD51Q06609 339 aa16.48■□□□□ 0.23
SNAP29-203ENST00000490458 C15orf59Q2T9L4 293 aaPredicted RBP16.48■□□□□ 0.23
SNAP29-203ENST00000490458 ARCQ7LC44 396 aa16.48■□□□□ 0.23
SNAP29-203ENST00000490458 Q8N9G6 341 aaPredicted RBP16.48■□□□□ 0.23
SNAP29-203ENST00000490458 OR6C4Q8NGE1 309 aa16.48■□□□□ 0.23
SNAP29-203ENST00000490458 USP7Q93009 1102 aa16.48■□□□□ 0.23
SNAP29-203ENST00000490458 TBC1D31Q96DN5 1066 aa16.48■□□□□ 0.23
SNAP29-203ENST00000490458 SEMA3CQ99985 751 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms