RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 BLKP51451 505 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 HK3P52790 923 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 RHOAP61586 193 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 PTP4A2Q12974 167 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 CLN3Q13286 438 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 TCEA2Q15560 299 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 INO80DQ53TQ3 878 aaPredicted RBP16.04■□□□□ 0.16
PLOD3-216ENST00000489927 NYAP1Q6ZVC0 841 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 HID1Q8IV36 788 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 PYROXD2Q8N2H3 581 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 FSTL5Q8N475 847 aaPredicted RBP16.04■□□□□ 0.16
PLOD3-216ENST00000489927 ARL10Q8N8L6 244 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 RTL3Q8N8U3 475 aaKnown RBP16.04■□□□□ 0.16
PLOD3-216ENST00000489927 KYQ8NBH2 561 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 PCDH19Q8TAB3 1148 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 CASKIN2Q8WXE0 1202 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 TSACCQ96A04 125 aaPredicted RBP16.04■□□□□ 0.16
PLOD3-216ENST00000489927 EXOC2Q96KP1 924 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 TAB2Q9NYJ8 693 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 SIRPGQ9P1W8 387 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 DACH1Q9UI36 760 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 RABGEF1Q9UJ41 708 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 DOLKQ9UPQ8 538 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 COQ6Q9Y2Z9 468 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 PIGNO95427 931 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 UNGP13051 313 aaPredicted RBP16.03■□□□□ 0.16
PLOD3-216ENST00000489927 C6P13671 934 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 EEF1GP26641 437 aaKnown RBP16.03■□□□□ 0.16
PLOD3-216ENST00000489927 EPHB2P29323 1055 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 SOX5P35711 763 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 PEX5P50542 639 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 JAM2P57087 298 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 LRRC14Q15048 493 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 ELOCQ15369 112 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 ALG11Q2TAA5 492 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 WSCD2Q2TBF2 565 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 TMEM52BQ4KMG9 183 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 CCDC81Q6ZN84 652 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 SLFN11Q7Z7L1 901 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 B3GNT8Q7Z7M8 397 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 SCG3Q8WXD2 468 aaKnown RBP16.03■□□□□ 0.16
PLOD3-216ENST00000489927 CCDC74AQ96AQ1 378 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 HMCESQ96FZ2 354 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 PCDHB18PQ96TA0 734 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 EDEM3Q9BZQ6 932 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 RP1P56715 2156 aa16.03■□□□□ 0.16
PLOD3-216ENST00000489927 TMEM110-MUSTN1A8MSY1 372 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 B8ZZF3 427 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 RASA4BC9J798 803 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 PLD2O14939 933 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 EPHB6O15197 1021 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 RASA4O43374 803 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 ALPIP09923 528 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 CTSEP14091 401 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 GPD1P21695 349 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 XPAP23025 273 aaPredicted RBP16.02■□□□□ 0.16
PLOD3-216ENST00000489927 SUOXP51687 545 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 POLR2FP61218 127 aaKnown RBP16.02■□□□□ 0.16
PLOD3-216ENST00000489927 ELP6Q0PNE2 266 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 SERINC3Q13530 473 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 INPP5AQ14642 412 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 CYTH1Q15438 398 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 ZSCAN23Q3MJ62 389 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 WDR59Q6PJI9 974 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 LVRNQ6Q4G3 990 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 ENPP7Q6UWV6 458 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 TRIM72Q6ZMU5 477 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 RD3Q7Z3Z2 195 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 MED8Q96G25 268 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 LIN37Q96GY3 246 aaPredicted RBP16.02■□□□□ 0.16
PLOD3-216ENST00000489927 GFM1Q96RP9 751 aaKnown RBP16.02■□□□□ 0.16
PLOD3-216ENST00000489927 NCAPGQ9BPX3 1015 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 CPEB1Q9BZB8 566 aaKnown RBP16.02■□□□□ 0.16
PLOD3-216ENST00000489927 FOXP3Q9BZS1 431 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 EPB41L5Q9HCM4 733 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 NLRC4Q9NPP4 1024 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 FAM207AQ9NSI2 230 aaPredicted RBP16.02■□□□□ 0.16
PLOD3-216ENST00000489927 ADAM22Q9P0K1 906 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 LHX3Q9UBR4 397 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 OR1A2Q9Y585 309 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 GTF3C3Q9Y5Q9 886 aa16.02■□□□□ 0.16
PLOD3-216ENST00000489927 A0A1W2PQM1 296 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 TSPAN11A1L157 253 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 D6RAR5 112 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 CREB3O43889 395 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 RASGRP1O95267 797 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 KRT10P13645 584 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 HTR1BP28222 390 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 NSFP46459 744 aaKnown RBP16.01■□□□□ 0.15
PLOD3-216ENST00000489927 GSCP56915 257 aaPredicted RBP16.01■□□□□ 0.15
PLOD3-216ENST00000489927 YBEYP58557 167 aaPredicted RBP16.01■□□□□ 0.15
PLOD3-216ENST00000489927 CCL7P80098 99 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 NFATC4Q14934 902 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 UGP2Q16851 508 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 PARP15Q460N3 678 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 EFHC2Q5JST6 749 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 KCTD16Q68DU8 428 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 SCYL2Q6P3W7 929 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 RAB11FIP2Q7L804 512 aa16.01■□□□□ 0.15
PLOD3-216ENST00000489927 SDR16C5Q8N3Y7 309 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms