RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 GRK6P43250 576 aa3.4□□□□□ -1.87
NF1-213ENST00000489712 PAPOLAP51003 745 aaKnown RBP3.4□□□□□ -1.87
NF1-213ENST00000489712 TNFAIP1Q13829 316 aa3.4□□□□□ -1.87
NF1-213ENST00000489712 SCN5AQ14524 2016 aa3.4□□□□□ -1.87
NF1-213ENST00000489712 CES5AQ6NT32 575 aa3.4□□□□□ -1.87
NF1-213ENST00000489712 PRSS45Q7RTY3 260 aa3.4□□□□□ -1.87
NF1-213ENST00000489712 CPXM2Q8N436 756 aa3.4□□□□□ -1.87
NF1-213ENST00000489712 USP38Q8NB14 1042 aa3.4□□□□□ -1.87
NF1-213ENST00000489712 EPYCQ99645 322 aa3.4□□□□□ -1.87
NF1-213ENST00000489712 SPRY4Q9C004 299 aa3.4□□□□□ -1.87
NF1-213ENST00000489712 MROH8Q9H579 483 aa3.4□□□□□ -1.87
NF1-213ENST00000489712 EPHX3Q9H6B9 360 aa3.4□□□□□ -1.87
NF1-213ENST00000489712 ALKBH4Q9NXW9 302 aa3.4□□□□□ -1.87
NF1-213ENST00000489712 RIPOR2Q9Y4F9 1068 aa3.4□□□□□ -1.87
NF1-213ENST00000489712 PCDHAC2Q9Y5I4 1007 aa3.4□□□□□ -1.87
NF1-213ENST00000489712 IGHV4OR15-8A0A075B7B6 117 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 hDV102S1A0JD36 115 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 ARHGAP10A1A4S6 786 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 CBY3A6NI87 242 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 B9A039 149 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 TULP2O00295 520 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 PER2O15055 1255 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 TIPRLO75663 272 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 RGS11O94810 467 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 NDUFB4O95168 129 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 GAS8-AS1O95177 125 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 CNPP09543 421 aaKnown RBP3.39□□□□□ -1.87
NF1-213ENST00000489712 PTPN2P17706 415 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 SRD5A1P18405 259 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 SSTR2P30874 369 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 RYKP34925 604 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 TRAPPC10P48553 1259 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 TBL3Q12788 808 aaKnown RBP3.39□□□□□ -1.87
NF1-213ENST00000489712 TROAPQ12815 778 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 OS9Q13438 667 aaPredicted RBP3.39□□□□□ -1.87
NF1-213ENST00000489712 ARHGEF6Q15052 776 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 KRTAP24-1Q3LI83 254 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 ATP13A5Q4VNC0 1218 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 PPP6R3Q5H9R7 873 aaPredicted RBP3.39□□□□□ -1.87
NF1-213ENST00000489712 ANO1Q5XXA6 986 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 C9orf139Q6ZV77 190 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 TUBA1AQ71U36 451 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 ZC3HC1Q86WB0 502 aaKnown RBP3.39□□□□□ -1.87
NF1-213ENST00000489712 NEK9Q8TD19 979 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 SORCS1Q8WY21 1168 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 CCT6BQ92526 530 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 FEM1CQ96JP0 617 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 CD180Q99467 661 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 TUBA1CQ9BQE3 449 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.39□□□□□ -1.87
NF1-213ENST00000489712 EVA1AQ9H8M9 152 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 EBF2Q9HAK2 575 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 SMARCAL1Q9NZC9 954 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 ZNF224Q9NZL3 707 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 SLCO3A1Q9UIG8 710 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 PCDHGB5Q9Y5G0 923 aa3.39□□□□□ -1.87
NF1-213ENST00000489712 A0A0U1RQF3 1178 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 VWA3AA6NCI4 1184 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 HSPB2A8KAH6 182 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 CYSRT1A8MQ03 144 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 HNRNPCL2B2RXH8 293 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 HSPA12AO43301 675 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 TSPAN3O60637 253 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 SOCS5O75159 536 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 MTA2O94776 668 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 KDM4BO94953 1096 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 SP1P08047 785 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 CD58P19256 250 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 CHATP28329 748 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 PIGAP37287 484 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 CXCR3P49682 368 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 NLRP5P59047 1200 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 TAF5Q15542 800 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 HSPB2Q16082 182 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 ESCO2Q56NI9 601 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 STPG1Q5TH74 334 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
NF1-213ENST00000489712 FAM122CQ6P4D5 195 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 TBC1D26Q86UD7 250 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 TMPRSS12Q86WS5 348 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 SFR1Q86XK3 245 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 DCUN1D3Q8IWE4 304 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 PARP16Q8N5Y8 322 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 GJC3Q8NFK1 279 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 ZC3HAV1LQ96H79 300 aaKnown RBP3.38□□□□□ -1.87
NF1-213ENST00000489712 COG8Q96MW5 612 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 UHRF2Q96PU4 802 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 SLC32A1Q9H598 525 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 UBTD1Q9HAC8 227 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 SLC9A2Q9UBY0 812 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 SIX4Q9UIU6 781 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 VDAC3Q9Y277 283 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 SNX9Q9Y5X1 595 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 A3GALT2U3KPV4 340 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 ADGRF5Q8IZF2 1346 aa3.38□□□□□ -1.87
NF1-213ENST00000489712 PABPN1LA6NDY0 278 aaKnown RBP3.37□□□□□ -1.87
NF1-213ENST00000489712 FAM90A7PA6NKC0 464 aa3.37□□□□□ -1.87
NF1-213ENST00000489712 SH2D7A6NKC9 451 aaPredicted RBP3.37□□□□□ -1.87
NF1-213ENST00000489712 FAM90A22PA8MWA6 464 aa3.37□□□□□ -1.87
NF1-213ENST00000489712 FAM90A12PA8MX19 464 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms