RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 MESP2Q0VG99 397 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 TRAF2Q12933 501 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 LAMB3Q13751 1172 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 CRYMQ14894 314 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 RASA2Q15283 850 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 AAK1Q2M2I8 961 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 LRRK1Q38SD2 2015 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 CARD16Q5EG05 197 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 EYSQ5T1H1 3165 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 CASC4Q6P4E1 433 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 RNF135Q8IUD6 432 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 DEFB123Q8N688 67 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 EFCAB3Q8N7B9 438 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 PPHLN1Q8NEY8 458 aaKnown RBP14.28□□□□□ -0.12
VPS26A-205ENST00000489656 OR2W6PQ8NHA6 318 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 CSGALNACT1Q8TDX6 532 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 SLC39A7Q92504 469 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 DNASE1L2Q92874 299 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 VOPP1Q96AW1 172 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 ATG2BQ96BY7 2078 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 CFAP36Q96G28 342 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 TM6SF2Q9BZW4 377 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 CIPCQ9C0C6 399 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 ATP13A3Q9H7F0 1226 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 EVLQ9UI08 416 aaPredicted RBP14.28□□□□□ -0.12
VPS26A-205ENST00000489656 RPL26L1Q9UNX3 145 aaKnown RBP14.28□□□□□ -0.12
VPS26A-205ENST00000489656 SLC8A2Q9UPR5 921 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 TCAF1Q9Y4C2 921 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 HEATR9A2RTY3 570 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 TRAFD1O14545 582 aaPredicted RBP14.27□□□□□ -0.13
VPS26A-205ENST00000489656 KAT7O95251 611 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 PAPSS2O95340 614 aaPredicted RBP14.27□□□□□ -0.13
VPS26A-205ENST00000489656 POP4O95707 220 aaKnown RBP14.27□□□□□ -0.13
VPS26A-205ENST00000489656 SYF2O95926 243 aaKnown RBP14.27□□□□□ -0.13
VPS26A-205ENST00000489656 TPH1P17752 444 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 PRKCHP24723 683 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 GRIA2P42262 883 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 RAD51Q06609 339 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 BCL2L1Q07817 233 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 E2F5Q15329 346 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 SKIV2LQ15477 1246 aaKnown RBP14.27□□□□□ -0.13
VPS26A-205ENST00000489656 KLHL38Q2WGJ6 581 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 MYLK3Q32MK0 819 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 PUS10Q3MIT2 529 aaKnown RBP14.27□□□□□ -0.13
VPS26A-205ENST00000489656 CEP85LQ5SZL2 805 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 PKN3Q6P5Z2 889 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 NUDT18Q6ZVK8 323 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 NLRP9Q7RTR0 991 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 TDRPQ86YL5 185 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 RIBC1Q8N443 379 aaPredicted RBP14.27□□□□□ -0.13
VPS26A-205ENST00000489656 SLC25A41Q8N5S1 370 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 UHMK1Q8TAS1 419 aaKnown RBP14.27□□□□□ -0.13
VPS26A-205ENST00000489656 FBF1Q8TES7 1133 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 CYB5D2Q8WUJ1 264 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 UCMAQ8WVF2 138 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 PEX13Q92968 403 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 CYTH2Q99418 400 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 ADGRE3Q9BY15 652 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 TNKS2Q9H2K2 1166 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 MOCS1Q9NZB8 636 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 HECAQ9UBI9 543 aaPredicted RBP14.27□□□□□ -0.13
VPS26A-205ENST00000489656 SLC24A2Q9UI40 661 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 RIMKLBQ9ULI2 386 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 CHKBQ9Y259 395 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 PCDHGC4Q9Y5F7 938 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 RPS6KL1Q9Y6S9 549 aa14.27□□□□□ -0.13
VPS26A-205ENST00000489656 F5P12259 2224 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 ZCWPW2A0A1B0GU75 182 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 EXOC1LA0A1B0GW35 172 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 A0A1W2PQ67 120 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 MROH6A6NGR9 719 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 FAM159BA6NKW6 160 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 RASGRF2O14827 1237 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 PGLSO95336 258 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 APODP05090 189 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 MYZAPP0CAP1 466 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 SP100P23497 879 aaPredicted RBP14.26□□□□□ -0.13
VPS26A-205ENST00000489656 SERPINA4P29622 427 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 GRIA4P48058 902 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 CCNHP51946 323 aaPredicted RBP14.26□□□□□ -0.13
VPS26A-205ENST00000489656 ST8SIA6P61647 398 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 FAM193AP78312 1265 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 GALNT3Q14435 633 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 POU6F1Q14863 301 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 KRT71Q3SY84 523 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 ACCSLQ4AC99 568 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 ANKRD20A4Q4UJ75 823 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 HABP4Q5JVS0 413 aaKnown RBP14.26□□□□□ -0.13
VPS26A-205ENST00000489656 CAPN12Q6ZSI9 719 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 Q6ZVU0 165 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 KDELC2Q7Z4H8 507 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 OR2A12Q8NGT7 310 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 SORCS1Q8WY21 1168 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 ECHDC3Q96DC8 303 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 LRIG1Q96JA1 1093 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 ZNF641Q96N77 438 aaPredicted RBP14.26□□□□□ -0.13
VPS26A-205ENST00000489656 DHRS4Q9BTZ2 278 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 KCNK12Q9HB15 430 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 TMBIM4Q9HC24 238 aa14.26□□□□□ -0.13
VPS26A-205ENST00000489656 TREX1Q9NSU2 369 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms