RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 STMN4Q9H169 189 aaPredicted RBP21.83■■□□□ 1.09
SMC4-221ENST00000489573 UBE2ZQ9H832 354 aaPredicted RBP21.83■■□□□ 1.09
SMC4-221ENST00000489573 PSMC3IPQ9P2W1 217 aaPredicted RBP21.83■■□□□ 1.09
SMC4-221ENST00000489573 CTNNAL1Q9UBT7 734 aa21.83■■□□□ 1.09
SMC4-221ENST00000489573 PRKAG3Q9UGI9 489 aa21.83■■□□□ 1.09
SMC4-221ENST00000489573 SLCO3A1Q9UIG8 710 aa21.83■■□□□ 1.09
SMC4-221ENST00000489573 FAM169AQ9Y6X4 670 aa21.83■■□□□ 1.09
SMC4-221ENST00000489573 ZCWPW2A0A1B0GU75 182 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 ANHXE9PGG2 379 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 PRLP01236 227 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 SRPRAP08240 638 aaKnown RBP21.82■■□□□ 1.08
SMC4-221ENST00000489573 DLDP09622 509 aaKnown RBP21.82■■□□□ 1.08
SMC4-221ENST00000489573 KCNA5P22460 613 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 NMBRP28336 390 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 GJA4P35212 333 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 NNMTP40261 264 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 RASA2Q15283 850 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 ZNF449Q6P9G9 518 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 TTC8Q8TAM2 541 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 SORCS1Q8WY21 1168 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 MYLIPQ8WY64 445 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 MRRFQ96E11 262 aaKnown RBP21.82■■□□□ 1.08
SMC4-221ENST00000489573 EURLQ9NYK6 297 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 PIAS1O75925 651 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 OPRD1P41143 372 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 MSH2P43246 934 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 BCL2L1Q07817 233 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 EIF4HQ15056 248 aaKnown RBP21.82■■□□□ 1.08
SMC4-221ENST00000489573 ITPRIPL2Q3MIP1 535 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 CARD16Q5EG05 197 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 CTAGE3PQ8IX95 158 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 PHTF2Q8N3S3 785 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 LPCAT1Q8NF37 534 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 SLC44A1Q8WWI5 657 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 RMDN1Q96DB5 314 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 CERS2Q96G23 380 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 ATP13A3Q9H7F0 1226 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 SMYD2Q9NRG4 433 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 ELOVL2Q9NXB9 296 aa21.82■■□□□ 1.08
SMC4-221ENST00000489573 NOVA2Q9UNW9 492 aaKnown RBP21.82■■□□□ 1.08
SMC4-221ENST00000489573 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.81■■□□□ 1.08
SMC4-221ENST00000489573 ARNTLO00327 626 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 SOCS5O75159 536 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 PDHA1P08559 390 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 ATP5DP30049 168 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 EIF2DP41214 584 aaKnown RBP21.81■■□□□ 1.08
SMC4-221ENST00000489573 MGAT5Q09328 741 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 CCDC85BQ15834 202 aaPredicted RBP21.81■■□□□ 1.08
SMC4-221ENST00000489573 SKIDA1Q1XH10 827 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 MYLK3Q32MK0 819 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 TNFAIP8L3Q5GJ75 292 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 ARMC12Q5T9G4 340 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 LRRC6Q86X45 466 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 UNC5BQ8IZJ1 945 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 PPM1NQ8N819 430 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 TERB1Q8NA31 727 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 PDCD6IPQ8WUM4 868 aaKnown RBP21.81■■□□□ 1.08
SMC4-221ENST00000489573 CDKL2Q92772 493 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 NXPE3Q969Y0 559 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 TLCD1Q96CP7 247 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 MYO19Q96H55 970 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 ZNF778Q96MU6 729 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 TUBGCP5Q96RT8 1024 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 PPANQ9NQ55 473 aaKnown RBP21.81■■□□□ 1.08
SMC4-221ENST00000489573 HECAQ9UBI9 543 aaPredicted RBP21.81■■□□□ 1.08
SMC4-221ENST00000489573 TBK1Q9UHD2 729 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 SLC8A2Q9UPR5 921 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 IKBKGQ9Y6K9 419 aa21.81■■□□□ 1.08
SMC4-221ENST00000489573 CCDC78A2IDD5 438 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 CXorf49A8MYA2 514 aaPredicted RBP21.8■■□□□ 1.08
SMC4-221ENST00000489573 MBTPS2O43462 519 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 TIMM44O43615 452 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 FZD6O60353 706 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 PIGNO95427 931 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 INHBAP08476 426 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 CCNHP51946 323 aaPredicted RBP21.8■■□□□ 1.08
SMC4-221ENST00000489573 MESP2Q0VG99 397 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 NAB1Q13506 487 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 LAMB3Q13751 1172 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 TMED2Q15363 201 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 SKIV2LQ15477 1246 aaKnown RBP21.8■■□□□ 1.08
SMC4-221ENST00000489573 PTPRNQ16849 979 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 ADGRD1Q6QNK2 874 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 Q6ZVU0 165 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 NLRP9Q7RTR0 991 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 RASSF3Q86WH2 238 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 CAMK1DQ8IU85 385 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 PLPP6Q8IY26 295 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 BLOC1S5Q8TDH9 187 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 DCAKDQ8WVC6 231 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 BRD9Q9H8M2 597 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 TREX1Q9NSU2 369 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 KIAA1549LQ6ZVL6 1849 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 MYLKQ15746 1914 aa21.8■■□□□ 1.08
SMC4-221ENST00000489573 PRRT4C9JH25 899 aa21.79■■□□□ 1.08
SMC4-221ENST00000489573 TRAFD1O14545 582 aaPredicted RBP21.79■■□□□ 1.08
SMC4-221ENST00000489573 HTRA2O43464 458 aaPredicted RBP21.79■■□□□ 1.08
SMC4-221ENST00000489573 BNIP3LO60238 219 aa21.79■■□□□ 1.08
SMC4-221ENST00000489573 PGLSO95336 258 aa21.79■■□□□ 1.08
SMC4-221ENST00000489573 PAPSS2O95340 614 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms