RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 ATF6P18850 670 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 CD68P34810 354 aaPredicted RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 SERPINB5P36952 375 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 GSK3AP49840 483 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 NEK3P51956 506 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 LIMK2P53671 638 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 SEC24CP53992 1094 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 WNT3AP56704 352 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 CORO7P57737 925 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 SLC7A9P82251 487 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 POU4F1Q01851 419 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 TFF2Q03403 129 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 ITKQ08881 620 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 ZBTB17Q13105 803 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 TBCCQ15814 346 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 MPPE1Q53F39 396 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 LACTB2Q53H82 288 aaPredicted RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 AARS2Q5JTZ9 985 aaKnown RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 HP1BP3Q5SSJ5 553 aaPredicted RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 RNF187Q5TA31 235 aaPredicted RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 FAXCQ5TGI0 409 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 RAP1GAP2Q684P5 730 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 IL31Q6EBC2 164 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 MRNIPQ6NTE8 343 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 KLC3Q6P597 504 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 LVRNQ6Q4G3 990 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.43□□□□□ -1.383e-6■■■□□ 16.5
SF3A3-208ENST00000489537 TMC7Q7Z402 723 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 DNAJB7Q7Z6W7 309 aaPredicted RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 SDCCAG8Q86SQ7 713 aaPredicted RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 SRLQ86TD4 932 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 WDR75Q8IWA0 830 aaKnown RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 MPP5Q8N3R9 675 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 CPXM2Q8N436 756 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 AFAP1L2Q8N4X5 818 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 TAB3Q8N5C8 712 aaPredicted RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 OR52K1Q8NGK4 314 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 ZSCAN18Q8TBC5 510 aaPredicted RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 TCP10LQ8TDR4 215 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 GIPC2Q8TF65 315 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 MZB1Q8WU39 189 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 ARNTL2Q8WYA1 636 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 PTPRN2Q92932 1015 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 PABPC5Q96DU9 382 aaKnown RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 CELF6Q96J87 481 aaKnown RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 C7orf26Q96N11 449 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 PSKH2Q96QS6 385 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 TCF12Q99081 682 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 RBBP8Q99708 897 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 CINPQ9BW66 212 aaPredicted RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 ANLNQ9NQW6 1124 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 C20orf96Q9NUD7 363 aaPredicted RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 TXLNGQ9NUQ3 528 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 SYBUQ9NX95 663 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 TBC1D14Q9P2M4 693 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 CTNNAL1Q9UBT7 734 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 MTO1Q9Y2Z2 717 aaKnown RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 SH3BP1Q9Y3L3 701 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 TCAF1Q9Y4C2 921 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 TCF20Q9UGU0 1960 aaKnown RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 C5orf42Q9H799 3197 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 ZCWPW2A0A1B0GU75 182 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 LOC285095A0A1B0GVY8 99 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 C2orf81A6NN90 581 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 F8W8V4 182 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 SLCO1B7G3V0H7 640 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 H0Y626 953 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 I6L893 689 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 COCHO43405 550 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 EDF1O60869 148 aaKnown RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 STC2O76061 302 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 NDST3O95803 873 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 OLFM2O95897 454 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 GLUD1P00367 558 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 RBP1P09455 135 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 MBL2P11226 248 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 TCF3P15923 654 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 HMGA1P17096 107 aaKnown RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 HDCP19113 662 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 TAC1P20366 129 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 CORO1AP31146 461 aaKnown RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 RPA3P35244 121 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 ADRA1AP35348 466 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 BMPR1AP36894 532 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 MAP2K3P46734 347 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 SERPINB4P48594 390 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 CSNK1DP48730 415 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 CLCN5P51795 746 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 MNAT1P51948 309 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 AP1S1P61966 158 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 SULT2A1Q06520 285 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 RAD51Q06609 339 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 TWF1Q12792 350 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 IFT88Q13099 833 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 DMC1Q14565 340 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 ZRSR2Q15696 482 aaKnown RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 SLC1A5Q15758 541 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 TTC19Q6DKK2 380 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms