RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 Q6ZVU0 165 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 TAOK1Q7L7X3 1001 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 NLRP9Q7RTR0 991 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 TMEM135Q86UB9 458 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 LRRC6Q86X45 466 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 TDRPQ86YL5 185 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 PPM1NQ8N819 430 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 BLOC1S5Q8TDH9 187 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 CSGALNACT1Q8TDX6 532 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 CYB5D2Q8WUJ1 264 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 UCMAQ8WVF2 138 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 SORCS1Q8WY21 1168 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 MYLIPQ8WY64 445 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 CERS2Q96G23 380 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 TUBGCP5Q96RT8 1024 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 RANBP9Q96S59 729 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 ZDHHC6Q9H6R6 413 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 PLAC1Q9HBJ0 212 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 CHRAC1Q9NRG0 131 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 C20orf96Q9NUD7 363 aaPredicted RBP10.1□□□□□ -0.79
USP11-211ENST00000489111 ELOVL2Q9NXB9 296 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 ZFATQ9P243 1243 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 VPS18Q9P253 973 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 TXNDC16Q9P2K2 825 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 HECAQ9UBI9 543 aaPredicted RBP10.1□□□□□ -0.79
USP11-211ENST00000489111 TBK1Q9UHD2 729 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 LGALS13Q9UHV8 139 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 PLA2G4CQ9UP65 541 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 FAM169AQ9Y6X4 670 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 TNRC18O15417 2968 aaPredicted RBP10.1□□□□□ -0.79
USP11-211ENST00000489111 TBC1D3BA6NDS4 549 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 GRXCR2A6NFK2 248 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 OTOL1A6NHN0 477 aaPredicted RBP10.09□□□□□ -0.79
USP11-211ENST00000489111 ANHXE9PGG2 379 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 POLR3GO15318 223 aaPredicted RBP10.09□□□□□ -0.79
USP11-211ENST00000489111 ALDH1A2O94788 518 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 PGLSO95336 258 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 PIGNO95427 931 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 POP4O95707 220 aaKnown RBP10.09□□□□□ -0.79
USP11-211ENST00000489111 CRTAMO95727 393 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 NMBRP28336 390 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 GJA4P35212 333 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 GRIA4P48058 902 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 SLC6A11P48066 632 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 CCNHP51946 323 aaPredicted RBP10.09□□□□□ -0.79
USP11-211ENST00000489111 RPL26P61254 145 aaKnown RBP10.09□□□□□ -0.79
USP11-211ENST00000489111 GRM3Q14832 879 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 RASA2Q15283 850 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 SMAD1Q15797 465 aaKnown RBP10.09□□□□□ -0.79
USP11-211ENST00000489111 GAB4Q2WGN9 574 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 MYLK3Q32MK0 819 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 TMEM215Q68D42 235 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 PDPK2PQ6A1A2 396 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 CYS1Q717R9 158 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 GLT6D1Q7Z4J2 308 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 KCNMB4Q86W47 210 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 SLC26A11Q86WA9 606 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 CAMK1DQ8IU85 385 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 TERB1Q8NA31 727 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 GABPB2Q8TAK5 448 aaPredicted RBP10.09□□□□□ -0.79
USP11-211ENST00000489111 FAM76AQ8TAV0 307 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 SLC44A1Q8WWI5 657 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 NXPE3Q969Y0 559 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 MFSD3Q96ES6 412 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 GTSE1Q9NYZ3 720 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 MOCS1Q9NZB8 636 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.09□□□□□ -0.79
USP11-211ENST00000489111 CTNNAL1Q9UBT7 734 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 PRKAG3Q9UGI9 489 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 SLCO3A1Q9UIG8 710 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 NOVA2Q9UNW9 492 aaKnown RBP10.09□□□□□ -0.79
USP11-211ENST00000489111 RPL26L1Q9UNX3 145 aaKnown RBP10.09□□□□□ -0.79
USP11-211ENST00000489111 PCDHB9Q9Y5E1 797 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 NOTCH4Q99466 2003 aa10.09□□□□□ -0.79
USP11-211ENST00000489111 IQANK1A0A1B0GTG1 560 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 ZCWPW2A0A1B0GU75 182 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 C2orf81A6NN90 581 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 TTC34A8MYJ7 566 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 C2CD4DB7Z1M9 353 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 MBTPS2O43462 519 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 ZNF821O75541 412 aaPredicted RBP10.08□□□□□ -0.8
USP11-211ENST00000489111 PIAS1O75925 651 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 KRT37O76014 449 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 KRT38O76015 456 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 PAPSS2O95340 614 aaPredicted RBP10.08□□□□□ -0.8
USP11-211ENST00000489111 SLC4A1P02730 911 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 APODP05090 189 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 PIRTP0C851 137 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 ERVK-10P10266 1014 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 KRT15P19012 456 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 HPDP32754 393 aaPredicted RBP10.08□□□□□ -0.8
USP11-211ENST00000489111 OPRD1P41143 372 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 GRIA2P42262 883 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 SERPINB9P50453 376 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 VASPP50552 380 aaPredicted RBP10.08□□□□□ -0.8
USP11-211ENST00000489111 MAGOHP61326 146 aaKnown RBP10.08□□□□□ -0.8
USP11-211ENST00000489111 PDE1BQ01064 536 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 THOC5Q13769 683 aaKnown RBP10.08□□□□□ -0.8
USP11-211ENST00000489111 E2F5Q15329 346 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 QPCTQ16769 361 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms