RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 GLOD4Q9HC38 313 aa15.29■□□□□ 0.04
FDPS-213ENST00000489003 PREBQ9HCU5 417 aa15.29■□□□□ 0.04
FDPS-213ENST00000489003 HAUS2Q9NVX0 235 aa15.29■□□□□ 0.04
FDPS-213ENST00000489003 NCDNQ9UBB6 729 aa15.29■□□□□ 0.04
FDPS-213ENST00000489003 EIF2B4Q9UI10 523 aaKnown RBP15.29■□□□□ 0.04
FDPS-213ENST00000489003 PILRBQ9UKJ0 227 aa15.29■□□□□ 0.04
FDPS-213ENST00000489003 PCDHGA5Q9Y5G8 931 aa15.29■□□□□ 0.04
FDPS-213ENST00000489003 RAI2Q9Y5P3 530 aa15.29■□□□□ 0.04
FDPS-213ENST00000489003 GPR179Q6PRD1 2367 aa15.29■□□□□ 0.04
FDPS-213ENST00000489003 USP34Q70CQ2 3546 aa15.29■□□□□ 0.04
FDPS-213ENST00000489003 A0A1W2PQU0 124 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 RIOK3O14730 519 aaKnown RBP15.28■□□□□ 0.04
FDPS-213ENST00000489003 FZD6O60353 706 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 SOCS5O75159 536 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 PCDH8O95206 1070 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 PRKCGP05129 697 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 PDHA1P08559 390 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 TGM1P22735 817 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 MSNP26038 577 aaKnown RBP15.28■□□□□ 0.04
FDPS-213ENST00000489003 PLA2G5P39877 138 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 SUOXP51687 545 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 GNG11P61952 73 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 POLR2LP62875 67 aaKnown RBP15.28■□□□□ 0.04
FDPS-213ENST00000489003 SKOR1P84550 965 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 SIX1Q15475 284 aaPredicted RBP15.28■□□□□ 0.04
FDPS-213ENST00000489003 PLA2G2CQ5R387 149 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 CYP2U1Q7Z449 544 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 PRPF39Q86UA1 669 aaKnown RBP15.28■□□□□ 0.04
FDPS-213ENST00000489003 SYT12Q8IV01 421 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 CDKL3Q8IVW4 592 aaPredicted RBP15.28■□□□□ 0.04
FDPS-213ENST00000489003 PIH1D2Q8WWB5 315 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 C1orf54Q8WWF1 131 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 SPOCK2Q92563 424 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 IMP4Q96G21 291 aaKnown RBP15.28■□□□□ 0.04
FDPS-213ENST00000489003 PBKQ96KB5 322 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 VAT1Q99536 393 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 GGT7Q9UJ14 662 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 DNPEPQ9ULA0 475 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 ZFR2Q9UPR6 939 aaKnown RBP15.28■□□□□ 0.04
FDPS-213ENST00000489003 PCDHB9Q9Y5E1 797 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 VPS13AQ96RL7 3174 aa15.28■□□□□ 0.04
FDPS-213ENST00000489003 MYO15AQ9UKN7 3530 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 A0A1W2PPC4 97 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 A0A1W2PQ67 120 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 MEI4A8MW99 385 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 UPK3BL1B0FP48 263 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 UPK3BL2E5RIL1 263 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 TSPAN6O43657 245 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 GFRA3O60609 400 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 PGLSO95336 258 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 PRLP01236 227 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 FGGP02679 453 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 SERPINF2P08697 491 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 XPAP23025 273 aaPredicted RBP15.27■□□□□ 0.04
FDPS-213ENST00000489003 CD27P26842 260 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 MAT2AP31153 395 aaKnown RBP15.27■□□□□ 0.04
FDPS-213ENST00000489003 MPLP40238 635 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 CD86P42081 329 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 SEMG2Q02383 582 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 SPEM2Q0P670 501 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 CCDC6Q16204 474 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 TMEM52BQ4KMG9 183 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 CFAP58Q5T655 872 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 PEAR1Q5VY43 1037 aaPredicted RBP15.27■□□□□ 0.04
FDPS-213ENST00000489003 SEL1L3Q68CR1 1132 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 TRIM69Q86WT6 500 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 HORMAD1Q86X24 394 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 PDCD6IPQ8WUM4 868 aaKnown RBP15.27■□□□□ 0.04
FDPS-213ENST00000489003 KLK6Q92876 244 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 TADA1Q96BN2 335 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 WDR24Q96S15 920 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 RBM15Q96T37 977 aaKnown RBP eCLIP15.27■□□□□ 0.04
FDPS-213ENST00000489003 MIR1-1HGQ9H1L0 117 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 PCDH12Q9NPG4 1184 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 KLHL8Q9P2G9 620 aaPredicted RBP15.27■□□□□ 0.04
FDPS-213ENST00000489003 TRHDEQ9UKU6 1024 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 PHTF1Q9UMS5 762 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 CHKBQ9Y259 395 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 ITM2BQ9Y287 266 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 SLCO1B1Q9Y6L6 691 aa15.27■□□□□ 0.04
FDPS-213ENST00000489003 LRRK1Q38SD2 2015 aa15.27■□□□□ 0.03
FDPS-213ENST00000489003 OTOGLQ3ZCN5 2332 aa15.27■□□□□ 0.03
FDPS-213ENST00000489003 ZFHX2Q9C0A1 2572 aaPredicted RBP15.27■□□□□ 0.03
FDPS-213ENST00000489003 ATXN2Q99700 1313 aaKnown RBP15.26■□□□□ 0.03
FDPS-213ENST00000489003 NEMP1O14524 444 aa15.26■□□□□ 0.03
FDPS-213ENST00000489003 KCNN4O15554 427 aa15.26■□□□□ 0.03
FDPS-213ENST00000489003 LATO43561 262 aa15.26■□□□□ 0.03
FDPS-213ENST00000489003 MMP20O60882 483 aa15.26■□□□□ 0.03
FDPS-213ENST00000489003 MT-CYBP00156 380 aaPredicted RBP15.26■□□□□ 0.03
FDPS-213ENST00000489003 ZNF806P0C7X5 589 aa15.26■□□□□ 0.03
FDPS-213ENST00000489003 NFKB1P19838 968 aa15.26■□□□□ 0.03
FDPS-213ENST00000489003 RPS21P63220 83 aaKnown RBP15.26■□□□□ 0.03
FDPS-213ENST00000489003 FAM193AP78312 1265 aa15.26■□□□□ 0.03
FDPS-213ENST00000489003 CCNG2Q16589 344 aa15.26■□□□□ 0.03
FDPS-213ENST00000489003 LONRF2Q1L5Z9 754 aa15.26■□□□□ 0.03
FDPS-213ENST00000489003 ZNF284Q2VY69 593 aa15.26■□□□□ 0.03
FDPS-213ENST00000489003 TMEM259Q4ZIN3 620 aa15.26■□□□□ 0.03
FDPS-213ENST00000489003 ANKRD20A2Q5SQ80 823 aa15.26■□□□□ 0.03
FDPS-213ENST00000489003 ARMC12Q5T9G4 340 aa15.26■□□□□ 0.03
FDPS-213ENST00000489003 ANKRD20A1Q5TYW2 823 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms