RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 ITIH5Q86UX2 942 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 ZC3HC1Q86WB0 502 aaKnown RBP6.69□□□□□ -1.34
HDLBP-243ENST00000488923 MIB1Q86YT6 1006 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 HERC6Q8IVU3 1022 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 ARID3BQ8IVW6 561 aaPredicted RBP6.69□□□□□ -1.34
HDLBP-243ENST00000488923 CMTR2Q8IYT2 770 aaKnown RBP6.69□□□□□ -1.34
HDLBP-243ENST00000488923 RNF168Q8IYW5 571 aaPredicted RBP6.69□□□□□ -1.34
HDLBP-243ENST00000488923 AFAP1L2Q8N4X5 818 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 SPATA22Q8NHS9 363 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 ZNF461Q8TAF7 563 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 TTC8Q8TAM2 541 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 PDCD6IPQ8WUM4 868 aaKnown RBP6.69□□□□□ -1.34
HDLBP-243ENST00000488923 USP13Q92995 863 aaPredicted RBP6.69□□□□□ -1.34
HDLBP-243ENST00000488923 TADA1Q96BN2 335 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 MFSD3Q96ES6 412 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 IFT43Q96FT9 208 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 HMCESQ96FZ2 354 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 TMEM169Q96HH4 297 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 IGSF21Q96ID5 467 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 ZNF512Q96ME7 567 aaPredicted RBP6.69□□□□□ -1.34
HDLBP-243ENST00000488923 RILPQ96NA2 401 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 ZNF558Q96NG5 402 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 ANKRD27Q96NW4 1050 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 DEFB118Q96PH6 123 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 OCSTAMPQ9BR26 566 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 TACO1Q9BSH4 297 aaKnown RBP6.69□□□□□ -1.34
HDLBP-243ENST00000488923 MCMBPQ9BTE3 642 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 HERC2P3Q9BVR0 1158 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 TLE6Q9H808 572 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 NMRAL1Q9HBL8 299 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 ATP13A1Q9HD20 1204 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 ALG13Q9NP73 1137 aaKnown RBP6.69□□□□□ -1.34
HDLBP-243ENST00000488923 NT5MQ9NPB1 228 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 IARS2Q9NSE4 1012 aaKnown RBP6.69□□□□□ -1.34
HDLBP-243ENST00000488923 IGSF5Q9NSI5 407 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 TREX1Q9NSU2 369 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 DNAJC28Q9NX36 388 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 MPP6Q9NZW5 540 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 DCTN4Q9UJW0 460 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 MKL2Q9ULH7 1088 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 TRIM33Q9UPN9 1127 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.69□□□□□ -1.34
HDLBP-243ENST00000488923 ACOT9Q9Y305 439 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 ASB3Q9Y575 518 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 PCDHB12Q9Y5F1 795 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 PSAT1Q9Y617 370 aa6.69□□□□□ -1.34
HDLBP-243ENST00000488923 PLXNA3P51805 1871 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.68□□□□□ -1.34
HDLBP-243ENST00000488923 CXorf51AA0A1B0GTR3 108 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 LOC285095A0A1B0GVY8 99 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 ZNF840PA6NDX5 716 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 FCHO1O14526 889 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 ABLIM3O94929 683 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 VAPBO95292 243 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 ATP6V1G2O95670 118 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 CRTAMO95727 393 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 MT-CYBP00156 380 aaPredicted RBP6.68□□□□□ -1.34
HDLBP-243ENST00000488923 URODP06132 367 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 SERPINF2P08697 491 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 RBP1P09455 135 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 FGF3P11487 239 aaPredicted RBP6.68□□□□□ -1.34
HDLBP-243ENST00000488923 CCL5P13501 91 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 EZRP15311 586 aaKnown RBP6.68□□□□□ -1.34
HDLBP-243ENST00000488923 PFKLP17858 780 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 ATF6P18850 670 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 ADSLP30566 484 aaPredicted RBP6.68□□□□□ -1.34
HDLBP-243ENST00000488923 OR1D2P34982 312 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 CSRP3P50461 194 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 OXCT1P55809 520 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 ABCE1P61221 599 aaKnown RBP6.68□□□□□ -1.34
HDLBP-243ENST00000488923 NAA20P61599 178 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 PRAMEP78395 509 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 DSG1Q02413 1049 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 GNA12Q03113 381 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 OVGP1Q12889 678 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 ZNF177Q13360 481 aaPredicted RBP6.68□□□□□ -1.34
HDLBP-243ENST00000488923 RAB33AQ14088 237 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 SEPT6Q14141 434 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 POU6F1Q14863 301 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 PCLAFQ15004 111 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 FAM83EQ2M2I3 478 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 DNAL1Q4LDG9 190 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 CFAP157Q5JU67 520 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 ARTNQ5T4W7 220 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 C6orf163Q5TEZ5 329 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 AGAP9Q5VTM2 703 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 SDHAF4Q5VUM1 108 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 LIPMQ5VYY2 423 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 MRNIPQ6NTE8 343 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 NEPROQ6NW34 567 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 CES3Q6UWW8 571 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 ZYG11AQ6WRX3 759 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 ARHGAP36Q6ZRI8 547 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 TFAP2DQ7Z6R9 452 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 SDCCAG8Q86SQ7 713 aaPredicted RBP6.68□□□□□ -1.34
HDLBP-243ENST00000488923 TMPRSS6Q8IU80 811 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 MFN1Q8IWA4 741 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 UNC5BQ8IZJ1 945 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 NETO2Q8NC67 525 aa6.68□□□□□ -1.34
HDLBP-243ENST00000488923 ZNF784Q8NCA9 323 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms