RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 GKN2Q86XP6 184 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 ZNF677Q86XU0 584 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 ZNF354CQ86Y25 554 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 HID1Q8IV36 788 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 KYQ8NBH2 561 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 RXFP2Q8WXD0 754 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 CCDC74AQ96AQ1 378 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 TUBGCP2Q9BSJ2 902 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 WRAP53Q9BUR4 548 aaKnown RBP19.26■□□□□ 0.67
GGPS1-206ENST00000488594 NAA15Q9BXJ9 866 aaKnown RBP19.26■□□□□ 0.67
GGPS1-206ENST00000488594 CPEB1Q9BZB8 566 aaKnown RBP19.26■□□□□ 0.67
GGPS1-206ENST00000488594 SIRPGQ9P1W8 387 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 RP1P56715 2156 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 MYO18BQ8IUG5 2567 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 F8VZ95 297 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 FAM72CH0Y354 149 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 CASC3O15234 703 aaKnown RBP19.25■□□□□ 0.67
GGPS1-206ENST00000488594 CELA2BP08218 269 aaPredicted RBP19.25■□□□□ 0.67
GGPS1-206ENST00000488594 TIMP2P16035 220 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 MMP8P22894 467 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 PTPN9P43378 593 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 RHOAP61586 193 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 NFATC4Q14934 902 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 CAMK4Q16566 473 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 C15orf59Q2T9L4 293 aaPredicted RBP19.25■□□□□ 0.67
GGPS1-206ENST00000488594 ALG11Q2TAA5 492 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 FAM72AQ5TYM5 149 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 FAM72DQ6L9T8 149 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 B3GNT8Q7Z7M8 397 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 FAM72BQ86X60 149 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 HCAR2Q8TDS4 363 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 TMEM159Q96B96 161 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 STK33Q9BYT3 514 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 GPR34Q9UPC5 381 aa19.25■□□□□ 0.67
GGPS1-206ENST00000488594 HEMK1Q9Y5R4 338 aaPredicted RBP19.25■□□□□ 0.67
GGPS1-206ENST00000488594 C2CD4BA6NLJ0 364 aa19.24■□□□□ 0.67
GGPS1-206ENST00000488594 EFSO43281 561 aa19.24■□□□□ 0.67
GGPS1-206ENST00000488594 ITGB2P05107 769 aa19.24■□□□□ 0.67
GGPS1-206ENST00000488594 RPLP0P05388 317 aaKnown RBP19.24■□□□□ 0.67
GGPS1-206ENST00000488594 CCL7P80098 99 aa19.24■□□□□ 0.67
GGPS1-206ENST00000488594 WSCD2Q2TBF2 565 aa19.24■□□□□ 0.67
GGPS1-206ENST00000488594 RAB6CQ53S08 254 aa19.24■□□□□ 0.67
GGPS1-206ENST00000488594 USP53Q70EK8 1073 aa19.24■□□□□ 0.67
GGPS1-206ENST00000488594 JAMLQ86YT9 394 aa19.24■□□□□ 0.67
GGPS1-206ENST00000488594 RTL3Q8N8U3 475 aaKnown RBP19.24■□□□□ 0.67
GGPS1-206ENST00000488594 CENPIQ92674 756 aaPredicted RBP19.24■□□□□ 0.67
GGPS1-206ENST00000488594 TSACCQ96A04 125 aaPredicted RBP19.24■□□□□ 0.67
GGPS1-206ENST00000488594 NTAN1Q96AB6 310 aa19.24■□□□□ 0.67
GGPS1-206ENST00000488594 SGF29Q96ES7 293 aa19.24■□□□□ 0.67
GGPS1-206ENST00000488594 FAM117AQ9C073 453 aa19.24■□□□□ 0.67
GGPS1-206ENST00000488594 RAB6CQ9H0N0 254 aa19.24■□□□□ 0.67
GGPS1-206ENST00000488594 WDR70Q9NW82 654 aa19.24■□□□□ 0.67
GGPS1-206ENST00000488594 RABGEF1Q9UJ41 708 aa19.24■□□□□ 0.67
GGPS1-206ENST00000488594 NVLO15381 856 aaKnown RBP19.23■□□□□ 0.67
GGPS1-206ENST00000488594 JMJD7P0C870 316 aa19.23■□□□□ 0.67
GGPS1-206ENST00000488594 YBEYP58557 167 aaPredicted RBP19.23■□□□□ 0.67
GGPS1-206ENST00000488594 SRP54P61011 504 aaKnown RBP19.23■□□□□ 0.67
GGPS1-206ENST00000488594 GRM3Q14832 879 aa19.23■□□□□ 0.67
GGPS1-206ENST00000488594 ENPP7Q6UWV6 458 aa19.23■□□□□ 0.67
GGPS1-206ENST00000488594 PRICKLE2Q7Z3G6 844 aa19.23■□□□□ 0.67
GGPS1-206ENST00000488594 GPT2Q8TD30 523 aa19.23■□□□□ 0.67
GGPS1-206ENST00000488594 NCAPGQ9BPX3 1015 aa19.23■□□□□ 0.67
GGPS1-206ENST00000488594 FOXP3Q9BZS1 431 aa19.23■□□□□ 0.67
GGPS1-206ENST00000488594 LRRN3Q9H3W5 708 aa19.23■□□□□ 0.67
GGPS1-206ENST00000488594 SEPT10Q9P0V9 454 aa19.23■□□□□ 0.67
GGPS1-206ENST00000488594 KLQ9UEF7 1012 aa19.23■□□□□ 0.67
GGPS1-206ENST00000488594 CHD5Q8TDI0 1954 aa19.23■□□□□ 0.67
GGPS1-206ENST00000488594 A0A1W2PQM1 296 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 PES1O00541 588 aaKnown RBP19.22■□□□□ 0.67
GGPS1-206ENST00000488594 NOBOXO60393 691 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 CYP1A1P04798 512 aaPredicted RBP19.22■□□□□ 0.67
GGPS1-206ENST00000488594 LIPCP11150 499 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 ITIH2P19823 946 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 EPHB2P29323 1055 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 CSRP3P50461 194 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 HDAC4P56524 1084 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 CDR2Q01850 454 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 NFATC3Q12968 1075 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 INPP5AQ14642 412 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 AGERQ15109 404 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 PARP15Q460N3 678 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 ERAP2Q6P179 960 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 RD3Q7Z3Z2 195 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 CCNJLQ8IV13 435 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 CCDC185Q8N715 623 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 FAM172AQ8WUF8 416 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 HMCESQ96FZ2 354 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 RBM15Q96T37 977 aaKnown RBP eCLIP19.22■□□□□ 0.67
GGPS1-206ENST00000488594 ARHGAP9Q9BRR9 750 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 APOOQ9BUR5 198 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 NOL6Q9H6R4 1146 aaKnown RBP19.22■□□□□ 0.67
GGPS1-206ENST00000488594 NOCTQ9UK39 431 aaKnown RBP19.22■□□□□ 0.67
GGPS1-206ENST00000488594 APPL1Q9UKG1 709 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 DGKBQ9Y6T7 804 aa19.22■□□□□ 0.67
GGPS1-206ENST00000488594 TSPAN11A1L157 253 aa19.21■□□□□ 0.67
GGPS1-206ENST00000488594 PYCARD-AS1I3L0S3 204 aa19.21■□□□□ 0.67
GGPS1-206ENST00000488594 ARHGAP6O43182 974 aa19.21■□□□□ 0.67
GGPS1-206ENST00000488594 TNFP01375 233 aa19.21■□□□□ 0.67
GGPS1-206ENST00000488594 SFTPCP11686 197 aa19.21■□□□□ 0.67
GGPS1-206ENST00000488594 PNLIPP16233 465 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms