RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 CKMT1AP12532 417 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 SERPINA4P29622 427 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 ARL4AP40617 200 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 DAB2P98082 770 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 E2F1Q01094 437 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 AGERQ15109 404 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 CFAP58Q5T655 872 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 HES3Q5TGS1 186 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 SRLQ86TD4 932 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 MARCH9Q86YJ5 346 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 TP53I13Q8NBR0 393 aaPredicted RBP23.32■■□□□ 1.32
CUL4A-209ENST00000488558 TSEN2Q8NCE0 465 aaKnown RBP23.32■■□□□ 1.32
CUL4A-209ENST00000488558 ZNF548Q8NEK5 533 aaPredicted RBP23.32■■□□□ 1.32
CUL4A-209ENST00000488558 TEKT4Q8WW24 435 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 TBATAQ96M53 351 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 CINPQ9BW66 212 aaPredicted RBP23.32■■□□□ 1.32
CUL4A-209ENST00000488558 THAP2Q9H0W7 228 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 ATP13A3Q9H7F0 1226 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 EVA1BQ9NVM1 165 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 GOLGA4Q13439 2230 aaKnown RBP23.31■■□□□ 1.32
CUL4A-209ENST00000488558 A0A087X0T9 212 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 CYP1A2P05177 515 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 FAM228BP0C875 321 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 JUPP14923 745 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 MMP12P39900 470 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 RGRP47804 291 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 THOP1P52888 689 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 ZSCAN23Q3MJ62 389 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 TPRG1LQ5T0D9 272 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 TMCO4Q5TGY1 634 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 ERAP2Q6P179 960 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 POLNQ7Z5Q5 900 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 BTN2A2Q8WVV5 523 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 ECHDC3Q96DC8 303 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 NXPE2Q96DL1 559 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 PSKH2Q96QS6 385 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 WRAP53Q9BUR4 548 aaKnown RBP23.31■■□□□ 1.32
CUL4A-209ENST00000488558 PCDH12Q9NPG4 1184 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.31■■□□□ 1.32
CUL4A-209ENST00000488558 IFNKQ9P0W0 207 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 IP6K2Q9UHH9 426 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 FAM208BQ5VWN6 2430 aa23.31■■□□□ 1.32
CUL4A-209ENST00000488558 BUB1BO60566 1050 aaPredicted RBP23.3■■□□□ 1.32
CUL4A-209ENST00000488558 TPM3P06753 285 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 ITIH2P19823 946 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 AP1S1P61966 158 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 SMTNL2Q2TAL5 461 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 ZNF542PQ5EBM4 170 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 TMCO3Q6UWJ1 677 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 MACC1Q6ZN28 852 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 ARHGAP36Q6ZRI8 547 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 CPLX3Q8WVH0 158 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 SPOCK2Q92563 424 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 NCKIPSDQ9NZQ3 722 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 SEPT3Q9UH03 358 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 ANAPC7Q9UJX3 599 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 NENFQ9UMX5 172 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 ATP8A1Q9Y2Q0 1164 aa23.3■■□□□ 1.32
CUL4A-209ENST00000488558 MYLKQ15746 1914 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 CFAP69A5D8W1 941 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 K7ESM1 405 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 AQP9O43315 295 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 GP1BAP07359 652 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 RARAP10276 462 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 TCF4P15884 667 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 JUNDP17535 347 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 HNRNPH3P31942 346 aaKnown RBP23.29■■□□□ 1.32
CUL4A-209ENST00000488558 HSPA9P38646 679 aaKnown RBP23.29■■□□□ 1.32
CUL4A-209ENST00000488558 DUSP3P51452 185 aaPredicted RBP23.29■■□□□ 1.32
CUL4A-209ENST00000488558 RENBPP51606 427 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 INSM1Q01101 510 aaPredicted RBP23.29■■□□□ 1.32
CUL4A-209ENST00000488558 SLC25A11Q02978 314 aaKnown RBP23.29■■□□□ 1.32
CUL4A-209ENST00000488558 EIF2B5Q13144 721 aaKnown RBP23.29■■□□□ 1.32
CUL4A-209ENST00000488558 ZCCHC8Q6NZY4 707 aaKnown RBP23.29■■□□□ 1.32
CUL4A-209ENST00000488558 ALKBH5Q6P6C2 394 aaKnown RBP23.29■■□□□ 1.32
CUL4A-209ENST00000488558 CAMK1DQ8IU85 385 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 HSPH1Q92598 858 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 APOLD1Q96LR9 279 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 CSPG4P5Q96PW8 444 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 NUP85Q9BW27 656 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 MBNL1Q9NR56 388 aaKnown RBP23.29■■□□□ 1.32
CUL4A-209ENST00000488558 KLF15Q9UIH9 416 aa23.29■■□□□ 1.32
CUL4A-209ENST00000488558 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.29■■□□□ 1.324e-7■□□□□ 11.3
CUL4A-209ENST00000488558 TPP1O14773 563 aa23.28■■□□□ 1.32
CUL4A-209ENST00000488558 C6P13671 934 aa23.28■■□□□ 1.32
CUL4A-209ENST00000488558 SERPINB6P35237 376 aa23.28■■□□□ 1.32
CUL4A-209ENST00000488558 PEX5P50542 639 aa23.28■■□□□ 1.32
CUL4A-209ENST00000488558 BCL2L1Q07817 233 aa23.28■■□□□ 1.32
CUL4A-209ENST00000488558 TARDBPQ13148 414 aaKnown RBP eCLIP23.28■■□□□ 1.323e-7■■■■□ 24.7
CUL4A-209ENST00000488558 LBRQ14739 615 aaKnown RBP23.28■■□□□ 1.32
CUL4A-209ENST00000488558 LRRC14Q15048 493 aa23.28■■□□□ 1.32
CUL4A-209ENST00000488558 IRF4Q15306 451 aa23.28■■□□□ 1.32
CUL4A-209ENST00000488558 SKOR2Q2VWA4 1001 aaPredicted RBP23.28■■□□□ 1.32
CUL4A-209ENST00000488558 ZSWIM9Q86XI8 627 aa23.28■■□□□ 1.32
CUL4A-209ENST00000488558 DCBLD1Q8N8Z6 715 aa23.28■■□□□ 1.32
CUL4A-209ENST00000488558 NRSN2Q9GZP1 204 aa23.28■■□□□ 1.32
CUL4A-209ENST00000488558 CAAP1Q9H8G2 361 aa23.28■■□□□ 1.32
CUL4A-209ENST00000488558 RCOR3Q9P2K3 495 aaPredicted RBP23.28■■□□□ 1.32
CUL4A-209ENST00000488558 SPASTQ9UBP0 616 aa23.28■■□□□ 1.32
CUL4A-209ENST00000488558 APOBEC3BQ9UH17 382 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms