RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 RAD51BO15315 384 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 PSTPIP1O43586 416 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 PAK4O96013 591 aaPredicted RBP23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 SEMG2Q02383 582 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 SLC10A2Q12908 348 aaPredicted RBP23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 SGCGQ13326 291 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 IFI16Q16666 785 aaKnown RBP23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 C11orf63Q6NUN7 778 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 BRAT1Q6PJG6 821 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 GCNT7Q6ZNI0 430 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 DAAM2Q86T65 1068 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 KIAA1328Q86T90 577 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 IQCHQ86VS3 1027 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 RFX6Q8HWS3 928 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 LRRC49Q8IUZ0 686 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 PLD5Q8N7P1 536 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 SETD7Q8WTS6 366 aaKnown RBP23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 KLHDC7BQ96G42 594 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 NSMCE3Q96MG7 304 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 ZNF830Q96NB3 372 aaPredicted RBP23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 MGME1Q9BQP7 344 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 MAK16Q9BXY0 300 aaKnown RBP23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 PCDH12Q9NPG4 1184 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 DTLQ9NZJ0 730 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 HEY1Q9Y5J3 304 aa23.89■■□□□ 1.41
RHBDD3-205ENST00000488106 ZNF487B1APH4 448 aa23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 APOL1O14791 398 aa23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 MMP20O60882 483 aa23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 THEGLP0DJG4 465 aa23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 CEACAM1P13688 526 aa23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 NAP1L1P55209 391 aaKnown RBP23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 DYNLT1P63172 113 aa23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 ELP6Q0PNE2 266 aa23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 UGP2Q16851 508 aa23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 TIGD7Q6NT04 549 aaPredicted RBP23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 PTAR1Q7Z6K3 402 aaPredicted RBP23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 ZSCAN30Q86W11 494 aa23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 SPATS2Q86XZ4 545 aaKnown RBP23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 TPCN2Q8NHX9 752 aa23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 HCAR2Q8TDS4 363 aa23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 PDCD6IPQ8WUM4 868 aaKnown RBP23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 NUDCD1Q96RS6 583 aa23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 ELF4Q99607 663 aaPredicted RBP23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 TTLL3Q9Y4R7 772 aa23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 DUSP10Q9Y6W6 482 aa23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 COL5A1P20908 1838 aaPredicted RBP23.88■■□□□ 1.41
RHBDD3-205ENST00000488106 PTPRBP23467 1997 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 MAGEC1O60732 1142 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 CR2P20023 1033 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 MX2P20592 715 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 MARCKSL1P49006 195 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 VAV2P52735 878 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 FOXK2Q01167 660 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 ITKQ08881 620 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 OVGP1Q12889 678 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 N4BP2L1Q5TBK1 243 aaPredicted RBP23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 SLC9A4Q6AI14 798 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 ERAP2Q6P179 960 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 MFSD7Q6UXD7 560 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 VSIG1Q86XK7 387 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 CCNYQ8ND76 341 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 OR13H1Q8NG92 308 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 DESI2Q9BSY9 194 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 C1QTNF2Q9BXJ5 285 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 NOD2Q9HC29 1040 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 ATP8A1Q9Y2Q0 1164 aa23.87■■□□□ 1.41
RHBDD3-205ENST00000488106 A0A1B0GTQ1 180 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 SPAARA0A1B0GVQ0 90 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 A6NNZ2 444 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 NEBLO76041 1014 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 CCNCP24863 283 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 MMP12P39900 470 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 SUOXP51687 545 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 LLGL1Q15334 1064 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 NPNTQ6UXI9 565 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 KDM7AQ6ZMT4 941 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 MAML1Q92585 1016 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 HDAC11Q96DB2 347 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 ECHDC3Q96DC8 303 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 TSGA13Q96PP4 275 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 LACRTQ9GZZ8 138 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 BTBD3Q9Y2F9 522 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 COQ6Q9Y2Z9 468 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 PCDHGC4Q9Y5F7 938 aa23.86■■□□□ 1.41
RHBDD3-205ENST00000488106 CEP295Q9C0D2 2601 aa23.85■■□□□ 1.41
RHBDD3-205ENST00000488106 POM121BA6NF01 834 aa23.85■■□□□ 1.41
RHBDD3-205ENST00000488106 TRAFD1O14545 582 aaPredicted RBP23.85■■□□□ 1.41
RHBDD3-205ENST00000488106 RIOK3O14730 519 aaKnown RBP23.85■■□□□ 1.41
RHBDD3-205ENST00000488106 MATN3O15232 486 aa23.85■■□□□ 1.41
RHBDD3-205ENST00000488106 FLRT2O43155 660 aa23.85■■□□□ 1.41
RHBDD3-205ENST00000488106 DFNA5O60443 496 aa23.85■■□□□ 1.41
RHBDD3-205ENST00000488106 TM7SF2O76062 418 aa23.85■■□□□ 1.41
RHBDD3-205ENST00000488106 ADRB1P08588 477 aa23.85■■□□□ 1.41
RHBDD3-205ENST00000488106 FAM193AP78312 1265 aa23.85■■□□□ 1.41
RHBDD3-205ENST00000488106 HNRNPDQ14103 355 aaKnown RBP23.85■■□□□ 1.41
RHBDD3-205ENST00000488106 TMEM52BQ4KMG9 183 aa23.85■■□□□ 1.41
RHBDD3-205ENST00000488106 ABI3BPQ7Z7G0 1075 aa23.85■■□□□ 1.41
RHBDD3-205ENST00000488106 GATAD2AQ86YP4 633 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms