RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 TARDBPQ13148 414 aaKnown RBP eCLIP11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 DPYSL2Q16555 572 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SMTNL2Q2TAL5 461 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PPP6R3Q5H9R7 873 aaPredicted RBP11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TTC7BQ86TV6 843 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 DCP2Q8IU60 420 aaKnown RBP11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PSTKQ8IV42 348 aaKnown RBP11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 DCBLD1Q8N8Z6 715 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 FAM181AQ8N9Y4 354 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ECHDC3Q96DC8 303 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 APOLD1Q96LR9 279 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 LRRC61Q9BV99 259 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TCEAL2Q9H3H9 227 aaPredicted RBP11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PCDH12Q9NPG4 1184 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 MBNL1Q9NR56 388 aaKnown RBP11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CWC15Q9P013 229 aaKnown RBP11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 NENFQ9UMX5 172 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 LHX6Q9UPM6 363 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 COQ6Q9Y2Z9 468 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ARHGAP42A6NI28 874 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 H3BM21 787 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TM7SF2O76062 418 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 RNF8O76064 485 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PEX11BO96011 259 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 C6P13671 934 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PCK1P35558 622 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 HNRNPKP61978 463 aaKnown RBP eCLIP11.32□□□□□ -0.64e-7■■■■□ 20.6
RAB11FIP3-210ENST00000487899 DAB2P98082 770 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SLC25A11Q02978 314 aaKnown RBP11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 RAD51Q06609 339 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 RALGDSQ12967 914 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SGCGQ13326 291 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 UGP2Q16851 508 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TMEM52BQ4KMG9 183 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TDRD12Q587J7 1177 aaKnown RBP11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CDCP2Q5VXM1 449 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TXNRD3NBQ6F5E7 133 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 MACC1Q6ZN28 852 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 NYAP1Q6ZVC0 841 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CAMK1DQ8IU85 385 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CXorf40AQ8TE69 158 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TRIM11Q96F44 468 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TUBGCP5Q96RT8 1024 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 NCAPGQ9BPX3 1015 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 THAP2Q9H0W7 228 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SUV39H2Q9H5I1 410 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SP110Q9HB58 689 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SCUBE2Q9NQ36 999 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ETNK2Q9NVF9 386 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 MYO1AQ9UBC5 1043 aa11.32□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CFAP46Q8IYW2 2715 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 A0A087WV48 116 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 A0A087X0T9 212 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 DFFAO00273 331 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 AQP9O43315 295 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TLX3O43711 291 aaPredicted RBP11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 LZTS3O60299 673 aaPredicted RBP11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PRKCGP05129 697 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CELA2BP08218 269 aaPredicted RBP11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 FAM228BP0C875 321 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 JUNDP17535 347 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 GM2AP17900 193 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CSNK1DP48730 415 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 HCAR3P49019 387 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SUOXP51687 545 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ZNF135P52742 658 aaPredicted RBP11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SEMG2Q02383 582 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 IL10RBQ08334 325 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ELP6Q0PNE2 266 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 GRM3Q14832 879 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 RTP5Q14D33 572 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ACAP1Q15027 740 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 AGERQ15109 404 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 WSCD2Q2TBF2 565 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 COL28A1Q2UY09 1125 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 KCTD16Q68DU8 428 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ZCCHC8Q6NZY4 707 aaKnown RBP11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 BRAT1Q6PJG6 821 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 C19orf48Q6RUI8 117 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 POLNQ7Z5Q5 900 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PHACTR4Q8IZ21 702 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 NIPA2Q8N8Q9 360 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 HCAR2Q8TDS4 363 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SYN2Q92777 582 aaPredicted RBP11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 BTBD6Q96KE9 485 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ZNF641Q96N77 438 aaPredicted RBP11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CSPG4P5Q96PW8 444 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PSKH2Q96QS6 385 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CINPQ9BW66 212 aaPredicted RBP11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ATP13A3Q9H7F0 1226 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 MRPL47Q9HD33 250 aaKnown RBP11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 DONSONQ9NYP3 566 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 APOBEC3BQ9UH17 382 aaKnown RBP11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CLCA2Q9UQC9 943 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ATP8A1Q9Y2Q0 1164 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PCDHB1Q9Y5F3 818 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CSNK1G3Q9Y6M4 447 aa11.31□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ZNF106Q9H2Y7 1883 aaKnown RBP11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 GCN1Q92616 2671 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms