RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 SBK1Q52WX2 424 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 CELF3Q5SZQ8 465 aaKnown RBP5.13□□□□□ -1.59
BRCA1-217ENST00000487825 NXNQ6DKJ4 435 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 PPP4R4Q6NUP7 873 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 TMEM65Q6PI78 240 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 ZNF813Q6ZN06 617 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 NANOGP1Q8N7R0 232 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 C11orf44Q8N8P7 122 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 STAMQ92783 540 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 SPATA33Q96N06 139 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 MYADMQ96S97 322 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 FAM118BQ9BPY3 351 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 ZNF287Q9HBT7 754 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 SNX15Q9NRS6 342 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 SETD4Q9NVD3 440 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 TRNAU1APQ9NX07 287 aaKnown RBP5.13□□□□□ -1.59
BRCA1-217ENST00000487825 COL20A1Q9P218 1284 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 MID2Q9UJV3 735 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 PNMA2Q9UL42 364 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 G3BP2Q9UN86 482 aaKnown RBP5.13□□□□□ -1.59
BRCA1-217ENST00000487825 RAI2Q9Y5P3 530 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 COL6A6A6NMZ7 2263 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 MYO9AB2RTY4 2548 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 NOTCH4Q99466 2003 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 PRB1P04280 392 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 ZNF806P0C7X5 589 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 APEHP13798 732 aaKnown RBP5.12□□□□□ -1.59
BRCA1-217ENST00000487825 NTSR1P30989 418 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 TIAL1Q01085 375 aaKnown RBP eCLIP5.12□□□□□ -1.59
BRCA1-217ENST00000487825 TROAPQ12815 778 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 MTAPQ13126 283 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 GIT2Q14161 759 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 ZNF750Q32MQ0 723 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 PXDC1Q5TGL8 231 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 DENND2CQ68D51 928 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 CMASQ8NFW8 434 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-217ENST00000487825 APIPQ96GX9 242 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 WDYHV1Q96HA8 205 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 HS6ST2Q96MM7 605 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 IWS1Q96ST2 819 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 LRRC27Q9C0I9 530 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 ZBP1Q9H171 429 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 CHST8Q9H2A9 424 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 WDR6Q9NNW5 1121 aaKnown RBP5.12□□□□□ -1.59
BRCA1-217ENST00000487825 SMC4Q9NTJ3 1288 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 TCEAL9Q9UHQ7 104 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 PADI3Q9ULW8 664 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 PCDHB7Q9Y5E2 793 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 CLUHO75153 1309 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 WDR19Q8NEZ3 1342 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 IGSF9BQ9UPX0 1349 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 RELNP78509 3460 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 DOPEY1Q5JWR5 2465 aa5.12□□□□□ -1.59
BRCA1-217ENST00000487825 CACNA1EQ15878 2313 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 VSTM5A8MXK1 200 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 E5RJQ4 531 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 M0R3H8 397 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 ADAM10O14672 748 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 NCAM2O15394 837 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 EIF3JO75822 258 aaKnown RBP5.11□□□□□ -1.59
BRCA1-217ENST00000487825 GGPS1O95749 300 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 PARP1P09874 1014 aaKnown RBP5.11□□□□□ -1.59
BRCA1-217ENST00000487825 MYF5P13349 255 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 LAMP2P13473 410 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 CEACAM1P13688 526 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 UBA1P22314 1058 aaKnown RBP5.11□□□□□ -1.59
BRCA1-217ENST00000487825 ACVR2AP27037 513 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 ADD2P35612 726 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 PBX3P40426 434 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 GPC5P78333 572 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 MRPS6P82932 125 aaKnown RBP5.11□□□□□ -1.59
BRCA1-217ENST00000487825 SRSF1Q07955 248 aaKnown RBP eCLIP5.11□□□□□ -1.59
BRCA1-217ENST00000487825 KCNAB1Q14722 419 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 WTAPQ15007 396 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 DARS2Q6PI48 645 aaKnown RBP5.11□□□□□ -1.59
BRCA1-217ENST00000487825 CYP26C1Q6V0L0 522 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 DCDC5Q6ZRR9 648 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 FAM43BQ6ZT52 329 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-217ENST00000487825 ZNF444Q8N0Y2 327 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-217ENST00000487825 SLC39A11Q8N1S5 342 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 LRRC43Q8N309 656 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 METTL25Q8N6Q8 603 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 C9orf106Q8NAJ2 232 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 OSR1Q8TAX0 266 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-217ENST00000487825 ZC3H10Q96K80 434 aaKnown RBP5.11□□□□□ -1.59
BRCA1-217ENST00000487825 ZNF558Q96NG5 402 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 TAAR1Q96RJ0 339 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 MAF1Q9H063 256 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 PRKRIP1Q9H875 184 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-217ENST00000487825 SPG21Q9NZD8 308 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 SLC4A4Q9Y6R1 1079 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 TNRC6BQ9UPQ9 1833 aaKnown RBP5.11□□□□□ -1.59
BRCA1-217ENST00000487825 KIF26AQ9ULI4 1882 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-217ENST00000487825 PI4KAP42356 2102 aa5.11□□□□□ -1.59
BRCA1-217ENST00000487825 URB1O60287 2271 aaKnown RBP5.11□□□□□ -1.59
BRCA1-217ENST00000487825 VWA8A3KMH1 1905 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 MBLAC1A4D2B0 266 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-217ENST00000487825 MUC22E2RYF6 1773 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-217ENST00000487825 J3QKU1 62 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 TPP1O14773 563 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms