RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 SLC46A3Q7Z3Q1 461 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 TMEM199Q8N511 208 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 METTL6Q8TCB7 284 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 POMGNT1Q8WZA1 660 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 ZBTB40Q9NUA8 1239 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 C20orf141Q9NUB4 165 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 NCKIPSDQ9NZQ3 722 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 NLKQ9UBE8 527 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 LIMA1Q9UHB6 759 aaKnown RBP3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 EME2A4GXA9 379 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 STMND1H3BQB6 276 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 HNRNPCL1O60812 293 aaKnown RBP3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 NDUFB8O95169 186 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 DDX58O95786 925 aaKnown RBP3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 MT-CYBP00156 380 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 CLEC3BP05452 202 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 HOXB5P09067 269 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 UBL4AP11441 157 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 CTPS1P17812 591 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 MYF6P23409 242 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 MAMLD1Q13495 774 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 KRT32Q14532 448 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 PRICKLE4Q2TBC4 344 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 PRTGQ2VWP7 1150 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 DPCR1Q3MIW9 517 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 Q5PR19 223 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 CCDC30Q5VVM6 783 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 HAUS3Q68CZ6 603 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 CDC73Q6P1J9 531 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 TMEM154Q6P9G4 183 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 FAM83HQ6ZRV2 1179 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 NEK10Q6ZWH5 1172 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 MOB3CQ70IA8 216 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 H1FNTQ75WM6 255 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 KIAA2013Q8IYS2 634 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 PDILTQ8N807 584 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 CADM4Q8NFZ8 388 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 GABPB2Q8TAK5 448 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 CEP76Q8TAP6 659 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 TMEM163Q8TC26 289 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 NEK9Q8TD19 979 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 NR1H4Q96RI1 486 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 CLSTN3Q9BQT9 956 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 MMTAG2Q9BU76 263 aaKnown RBP3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 NUF2Q9BZD4 464 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 LHPPQ9H008 270 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 MRPL44Q9H9J2 332 aaKnown RBP3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 BPIFA1Q9NP55 256 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 EHD2Q9NZN4 543 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 PCDHA12Q9UN75 941 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 A4GNTQ9UNA3 340 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 AAR2Q9Y312 384 aaKnown RBP3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 UTYO14607 1347 aa3.93□□□□□ -1.78
HMGB1P36-201ENST00000487709 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 TMEM272A0A1B0GTI8 110 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 PGPEP1LA6NFU8 196 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 A6NNC1 897 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 USP17L23D6RBM5 183 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 MS4A18H0YCH9 400 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 VWA5AO00534 786 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 HSPB6O14558 160 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 TNFSF14O43557 240 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 SLC28A2O43868 658 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 TIPRLO75663 272 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 GAS8-AS1O95177 125 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 CYP1A2P05177 515 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 ACADMP11310 421 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 CHRNB2P17787 502 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 NFKBIAP25963 317 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 GNAQP50148 359 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 RASSF2P50749 326 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 SETQ01105 290 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 SLC18A2Q05940 514 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 DCTN2Q13561 401 aaKnown RBP3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 GPR18Q14330 331 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 ARHGEF6Q15052 776 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 TCTN1Q2MV58 587 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 FBXO43Q4G163 708 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 SLC9B1Q4ZJI4 515 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 PLD5Q8N7P1 536 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 OR4N2Q8NGD1 307 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 SLC25A28Q96A46 364 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 TMEM18Q96B42 140 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 KLHL31Q9H511 634 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 WDR6Q9NNW5 1121 aaKnown RBP3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 EIF2B3Q9NR50 452 aaKnown RBP3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 ANKRD10Q9NXR5 420 aa3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 PLEKHB1Q9UF11 243 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P36-201ENST00000487709 ANKRD18BA2A2Z9 1011 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 ZNF814B7Z6K7 855 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 H0YGN5 161 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 ASAP2O43150 1006 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 RNASEH2AO75792 299 aaKnown RBP3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 NDUFB4O95168 129 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 TFP02787 698 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 HEXAP06865 529 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 PLA2G2AP14555 144 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 RXRGP48443 463 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 POLD2P49005 469 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms