RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 ELOA2Q8IYF1 753 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-228ENST00000487354 NETO2Q8NC67 525 aa15.53■□□□□ 0.08
MCF2L-228ENST00000487354 PDXPQ96GD0 296 aa15.53■□□□□ 0.08
MCF2L-228ENST00000487354 CFAP57Q96MR6 1250 aa15.53■□□□□ 0.08
MCF2L-228ENST00000487354 ARHGAP9Q9BRR9 750 aa15.53■□□□□ 0.08
MCF2L-228ENST00000487354 WRAP53Q9BUR4 548 aaKnown RBP15.53■□□□□ 0.08
MCF2L-228ENST00000487354 OSBPL1AQ9BXW6 950 aa15.53■□□□□ 0.08
MCF2L-228ENST00000487354 STRADBQ9C0K7 418 aa15.53■□□□□ 0.08
MCF2L-228ENST00000487354 WDR70Q9NW82 654 aa15.53■□□□□ 0.08
MCF2L-228ENST00000487354 GPR34Q9UPC5 381 aa15.53■□□□□ 0.08
MCF2L-228ENST00000487354 COQ6Q9Y2Z9 468 aa15.53■□□□□ 0.08
MCF2L-228ENST00000487354 ATP6V1DQ9Y5K8 247 aa15.53■□□□□ 0.08
MCF2L-228ENST00000487354 UTP20O75691 2785 aaKnown RBP15.53■□□□□ 0.08
MCF2L-228ENST00000487354 USP9XQ93008 2570 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-228ENST00000487354 CLEC18AA5D8T8 446 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 FAM72CH0Y354 149 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 TMX2-CTNND1H3BSU7 103 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 AGRPO00253 132 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 FOXN3O00409 490 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-228ENST00000487354 JMJD7P0C870 316 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 TIMP2P16035 220 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 NRG1Q02297 640 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-228ENST00000487354 PTK2Q05397 1052 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 PAK1Q13153 545 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 NFATC4Q14934 902 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 CERCAMQ5T4B2 595 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 FAM72AQ5TYM5 149 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 FAM72DQ6L9T8 149 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 CLEC18BQ6UXF7 455 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 GDPD4Q6W3E5 623 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 SPRED1Q7Z699 444 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 FAM72BQ86X60 149 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 RYBPQ8N488 228 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-228ENST00000487354 CLEC18CQ8NCF0 446 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 ARHGEF26Q96DR7 871 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 FAM81BQ96LP2 452 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 TMEM74Q96NL1 305 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 RBM15Q96T37 977 aaKnown RBP eCLIP15.52■□□□□ 0.08
MCF2L-228ENST00000487354 NOL6Q9H6R4 1146 aaKnown RBP15.52■□□□□ 0.08
MCF2L-228ENST00000487354 SYNCQ9H7C4 482 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 GEMIN8Q9NWZ8 242 aaKnown RBP15.52■□□□□ 0.08
MCF2L-228ENST00000487354 ANKMY1Q9P2S6 941 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 APPL1Q9UKG1 709 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 PAXBP1Q9Y5B6 917 aa15.52■□□□□ 0.08
MCF2L-228ENST00000487354 BIN1O00499 593 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 TMCC1O94876 653 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 RASGRP1O95267 797 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 POP4O95707 220 aaKnown RBP15.51■□□□□ 0.07
MCF2L-228ENST00000487354 ALPIP09923 528 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 PEX5P50542 639 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 SNRPD1P62314 119 aaKnown RBP15.51■□□□□ 0.07
MCF2L-228ENST00000487354 C16orf72Q14CZ0 275 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 TMEM52BQ4KMG9 183 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 MANEAQ5SRI9 462 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 SMYD5Q6GMV2 418 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 OGFOD3Q6PK18 319 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 TTC7BQ86TV6 843 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 IRF2BP1Q8IU81 584 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 FAM71AQ8IYT1 594 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 CXorf40AQ8TE69 158 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 USP7Q93009 1102 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 PMEPA1Q969W9 287 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 SLC12A9Q9BXP2 914 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 KLC2Q9H0B6 622 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 SLC25A18Q9H1K4 315 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 TMEM248Q9NWD8 314 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 DNAI1Q9UI46 699 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 OR1A2Q9Y585 309 aa15.51■□□□□ 0.07
MCF2L-228ENST00000487354 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.5■□□□□ 0.07
MCF2L-228ENST00000487354 INSIG1O15503 277 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 PPFIA2O75334 1257 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 KRT9P35527 623 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 MAPKAPK2P49137 400 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 BLKP51451 505 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 SNX16P57768 344 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 SRP54P61011 504 aaKnown RBP15.5■□□□□ 0.07
MCF2L-228ENST00000487354 EXOC3L4Q17RC7 722 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 ENPP7Q6UWV6 458 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 GBP6Q6ZN66 633 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 GKN2Q86XP6 184 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 Q8N9G6 341 aaPredicted RBP15.5■□□□□ 0.07
MCF2L-228ENST00000487354 C18orf8Q96DM3 657 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 APOOQ9BUR5 198 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 C1QTNF7Q9BXJ2 289 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 EPN3Q9H201 632 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 SEMA6CQ9H3T2 930 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 DKK3Q9UBP4 350 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 DNAJC12Q9UKB3 198 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 DOLKQ9UPQ8 538 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 MFHAS1Q9Y4C4 1052 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 RNF215Q9Y6U7 377 aa15.5■□□□□ 0.07
MCF2L-228ENST00000487354 A0A1W2PQC6 194 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 TSPAN11A1L157 253 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 GTPBP10A4D1E9 387 aaKnown RBP15.49■□□□□ 0.07
MCF2L-228ENST00000487354 SFTPCP11686 197 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 CTSEP14091 401 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 RHOQP17081 205 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 HLTFQ14527 1009 aaKnown RBP eCLIP15.49■□□□□ 0.07
MCF2L-228ENST00000487354 INPP5AQ14642 412 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 LRRC14Q15048 493 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms