RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 MRPL58Q14197 206 aaKnown RBP26.32■■□□□ 1.8
HLA-C-208ENST00000487245 CNGA3Q16281 694 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 OGFRL1Q5TC84 451 aaPredicted RBP26.32■■□□□ 1.8
HLA-C-208ENST00000487245 RNF220Q5VTB9 566 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 SDHAF4Q5VUM1 108 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 MAELQ96JY0 434 aaKnown RBP26.32■■□□□ 1.8
HLA-C-208ENST00000487245 ATP13A1Q9HD20 1204 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 TMEM161AQ9NX61 479 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 EPHA3P29320 983 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 NUDT2P50583 147 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 SATB1Q01826 763 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 CTBP1Q13363 440 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 TSTD2Q5T7W7 516 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 MARC1Q5VT66 337 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 BNC2Q6ZN30 1099 aaPredicted RBP26.32■■□□□ 1.8
HLA-C-208ENST00000487245 CEP97Q8IW35 865 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 DENND6AQ8IWF6 608 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 DSELQ8IZU8 1212 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 PGAM4Q8N0Y7 254 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 KDM1BQ8NB78 822 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 PHC3Q8NDX5 983 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 AGR3Q8TD06 166 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 RNF186Q9NXI6 227 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 THSD7BQ9C0I4 1608 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 MAP3K13O43283 966 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 PAPSS2O95340 614 aaPredicted RBP26.31■■□□□ 1.8
HLA-C-208ENST00000487245 AVPR1AP37288 418 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 GLRBP48167 497 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 GPR15P49685 360 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 DLG1Q12959 904 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 SEPT6Q14141 434 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 MBTPS1Q14703 1052 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 PIGGQ5H8A4 983 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 FOXB2Q5VYV0 432 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 ZNF280DQ6N043 979 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 NEPROQ6NW34 567 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 PIWIL4Q7Z3Z4 852 aaKnown RBP26.31■■□□□ 1.8
HLA-C-208ENST00000487245 NXNL1Q96CM4 212 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 TUBGCP5Q96RT8 1024 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 NUF2Q9BZD4 464 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 ZBTB26Q9HCK0 441 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 TLR8Q9NR97 1041 aaKnown RBP26.31■■□□□ 1.8
HLA-C-208ENST00000487245 MRGBPQ9NV56 204 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 FBXO5Q9UKT4 447 aa26.31■■□□□ 1.8
HLA-C-208ENST00000487245 TRPC5OSA6NMA1 111 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 NEMP1O14524 444 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 AIM2O14862 343 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 PEX2P28328 305 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 GRK4P32298 578 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 SLC1A2P43004 574 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 CCR10P46092 362 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 SERPINH1P50454 418 aaKnown RBP26.3■■□□□ 1.8
HLA-C-208ENST00000487245 SP3Q02447 781 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 EFEMP1Q12805 493 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 ILF2Q12905 390 aaKnown RBP26.3■■□□□ 1.8
HLA-C-208ENST00000487245 ZNF423Q2M1K9 1284 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 LPCAT4Q643R3 524 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 SDCCAG8Q86SQ7 713 aaPredicted RBP26.3■■□□□ 1.8
HLA-C-208ENST00000487245 TEX26Q8N6G2 289 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 FBXO32Q969P5 355 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 HMCESQ96FZ2 354 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 ELAC1Q9H777 363 aaKnown RBP26.3■■□□□ 1.8
HLA-C-208ENST00000487245 SP110Q9HB58 689 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 NT5MQ9NPB1 228 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 SLC2A6Q9UGQ3 507 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 RNASEH1O60930 286 aaKnown RBP26.3■■□□□ 1.8
HLA-C-208ENST00000487245 SLC12A2P55011 1212 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 USP46P62068 366 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 SMARCB1Q12824 385 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 MED21Q13503 144 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 ZFP1Q6P2D0 407 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 PIP4K2CQ8TBX8 421 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 ELMO2Q96JJ3 720 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 GBP5Q96PP8 586 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 TBC1D30Q9Y2I9 924 aa26.3■■□□□ 1.8
HLA-C-208ENST00000487245 DRGXA6NNA5 263 aa26.29■■□□□ 1.8
HLA-C-208ENST00000487245 ATP5F1P24539 256 aaPredicted RBP26.29■■□□□ 1.8
HLA-C-208ENST00000487245 HOXD10P28358 340 aa26.29■■□□□ 1.8
HLA-C-208ENST00000487245 PEX19P40855 299 aa26.29■■□□□ 1.8
HLA-C-208ENST00000487245 TAS2R39P59534 338 aa26.29■■□□□ 1.8
HLA-C-208ENST00000487245 GRM2Q14416 872 aa26.29■■□□□ 1.8
HLA-C-208ENST00000487245 TRIP10Q15642 601 aa26.29■■□□□ 1.8
HLA-C-208ENST00000487245 ZNF470Q6ECI4 717 aa26.29■■□□□ 1.8
HLA-C-208ENST00000487245 GALNT7Q86SF2 657 aa26.29■■□□□ 1.8
HLA-C-208ENST00000487245 PQLC1Q8N2U9 271 aa26.29■■□□□ 1.8
HLA-C-208ENST00000487245 EFCAB3Q8N7B9 438 aa26.29■■□□□ 1.8
HLA-C-208ENST00000487245 SLC43A3Q8NBI5 491 aa26.29■■□□□ 1.8
HLA-C-208ENST00000487245 ZNF483Q8TF39 744 aaPredicted RBP26.29■■□□□ 1.8
HLA-C-208ENST00000487245 FAR2Q96K12 515 aa26.29■■□□□ 1.8
HLA-C-208ENST00000487245 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.29■■□□□ 1.8
HLA-C-208ENST00000487245 NCKIPSDQ9NZQ3 722 aa26.29■■□□□ 1.8
HLA-C-208ENST00000487245 HSPA1AP0DMV8 641 aaKnown RBP26.28■■□□□ 1.8
HLA-C-208ENST00000487245 HSPA1BP0DMV9 641 aaKnown RBP26.28■■□□□ 1.8
HLA-C-208ENST00000487245 ITKQ08881 620 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 PCSK7Q16549 785 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 PPM1LQ5SGD2 360 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 SPPL2BQ8TCT7 592 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 CCDC126Q96EE4 140 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 MOCOSQ96EN8 888 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 SPATA17Q96L03 361 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms